Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00289 ATGCTAGCCAATATTTATGGTTCTCAAGCGACCCGGGCGCGTCGATGGAGAAGAAGTGTTATTCATCACATTGATCACTACTATGGCTTACCTCATGTCATATTGGTCTTCAGTAATTTGCCTGCAACGTCTCTATACACTCCTCTTTGGCGTAATGGACCTCCCGACAAACCGGTGTTATGCAATGCGTGTGGATCCCGATGGAGGACGAAAGGAACACTCACAAACTATACCCCGTTGCATGCTCGGACTGTTCCTGATGAATATGAAGATCACAGGGCTTCCAGGGTGAAGAGCATTTCAATAAATAAAAATAAAGAAGTAAAACTGCTGAAACGAAAGCTACAACAAGCCGATGGATCGATTGCGTGGATGCTTCCCGATCAAGGTCAGGATTACCATAGAGTAGTGGATGAAGACACAAGCAATAGGTCGAGTTCTGGATCGGCCATATCTAATCCTGAGAGTTGTGCCCATTTCAGCAGTGCAGATGCAAGTGATTTGACAGGTTAA 513 45.22 MLANIYGSQATRARRWRRSVIHHIDHYYGLPHVILVFSNLPATSLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADASDLTG 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4335425 4336167 - Carg25081-RA Car19g00289 167256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00289 170 MobiDBLite consensus disorder prediction 142 170 - -
Car19g00289 170 MobiDBLite consensus disorder prediction 139 170 - -
Car19g00289 170 Pfam GATA zinc finger 47 73 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00289 Car-Chr19:4335425 Car01g00085 Car-Chr1:458684 2.28E-06 dispersed
Car19g00289 Car-Chr19:4335425 Car02g01335 Car-Chr2:8829645 3.30E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5260 PF00320 GATA 2.40E-10 CL0167 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00289 - - cmax:111470531 253.447