Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00304 ATGAACGGAGAGCAAAACGACACGTCCCAGAGCGGCGGAGAGAGAGAGAGAGAAAGCGGCGGAGAGAAAAGTATGGGGCTACCGGTGAAGGCTTTTCCGTTCACTGTGGTGAGTCATGTACTGGCAATCGTGGCGCTGATTCTTGTCCTCGTTTGGGCCGTTCACTTCAGAGGCGGCCTGGCTTGGGAGGCTGTCAATAAGAACCTCATCTTCAACATTCATCCTGTTCTTATGCTACTCGGGTTGATCATCATAGGAGGAGAAGCAATAATTAGTTATAAATCACTGCCATTGAGAAAAGAAGTAAAAAAGGTGATCCATTTGGTGCTACACGGCGTCGCTTTGGCACTGGGCATCGTGGGAATCTGGGCAGCATTCAAAAACCATAATGAAAGCGGGATCCCTAATCTTTACAGCTTGCATTCCTGGATTGGAATTGGCGTAATTGCCCTGTATGGTGTCCAGTGTAATATGCGGTGGGGTACTCGGCGCGGGGTTGTTAGAGAACGACGTTTCCGAGAGCGGGGGGTTGAAAATACGAGTGAGGCGTTTCTTGTGAACTTCACTGCATCATGCACTATAGTTTGA 588 49.15 MNGEQNDTSQSGGERERESGGEKSMGLPVKAFPFTVVSHVLAIVALILVLVWAVHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIWAAFKNHNESGIPNLYSLHSWIGIGVIALYGVQCNMRWGTRRGVVRERRFRERGVENTSEAFLVNFTASCTIV 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4571821 4574415 + Carg25096-RA Car19g00304 167271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00304 195 MobiDBLite consensus disorder prediction 1 24 - -
Car19g00304 195 Pfam Eukaryotic cytochrome b561 73 156 IPR006593 -
Car19g00304 195 ProSiteProfiles Cytochrome b561 domain profile. 37 195 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02735 Car-Chr4:21142225 Car19g00304 Car-Chr19:4571821 2.55E-42 dispersed
Car15g00204 Car-Chr15:1108665 Car19g00304 Car-Chr19:4571821 1.56E-42 dispersed
Car18g00976 Car-Chr18:10297132 Car19g00304 Car-Chr19:4571821 2.23E-18 dispersed
Car19g00304 Car-Chr19:4571821 Car02g00806 Car-Chr2:5867166 7.73E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00304 K08360 - csv:101209308 206.453