Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00320 ATGTCAGATTTGGTGACGCTGAGCAAGACAAACAGAGCTCAACTAATTTCTGATTCATCTATTCTCGATCTCACAATTGAATTTTTGATCGTATGGGCTGGATACTTCCGAGTTCCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCAACAGCCAGCAGAAGAAAAGAGCGCTGCACACCATCATCGTTTTAGCGGGTCGAATGCTTGTTCCACTTGTGGTATCCAAGAGGTTGTTCTGGAGGCCTACGGATGGGTCAGCAACAGGACAAGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTCAGGCAAAGAGCATACCAAACGAGCCCGGAAGAAGAATACGACAGATACGAGAGATACAACACTTACCGAAGAGTCCTAAGGTCCATATGCCCCGAAACGGGGCAAGACCAGAGGGTAGCGCCCTTAGACTTTAGGACACCGGCAAGGTTTGACAACCACTATTTCCTCAACATTCTTGAAGGGAAAGCCCTTTTGGGGTCCGACAATGTGCTCATAACTCAAGACCATGAAGGTGAGATCACAAGACAAGTTTGGAGCTATGCCTCTGACCAAACCCTTTTCTTTGCTTCCTTTGTTAAGTCCATTGTCAAGATGGGGAACATCAACGTCCTCACTGCCAATCTCGGTGAAGTCCGAACCAATTGTAGGTTTACCAATCACTAG 705 47.23 MSDLVTLSKTNRAQLISDSSILDLTIEFLIVWAGYFRVPHTTHLSLTGFSKLPNSQQKKRALHTIIVLAGRMLVPLVVSKRLFWRPTDGSATGQGSHTIGKARCLSFRQRAYQTSPEEEYDRYERYNTYRRVLRSICPETGQDQRVAPLDFRTPARFDNHYFLNILEGKALLGSDNVLITQDHEGEITRQVWSYASDQTLFFASFVKSIVKMGNINVLTANLGEVRTNCRFTNH 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5009873 5014189 + Carg27407-RA Car19g00320 167287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00320 234 Pfam Peroxidase 77 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car19g00320 234 ProSiteProfiles Plant heme peroxidase family profile. 1 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00320 Car-Chr19:5009873 Car16g00669 Car-Chr16:4236763 3.17E-33 dispersed
Car19g00320 Car-Chr19:5009873 Car19g00328 Car-Chr19:5167788 1.05E-101 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00320 K00430 - csv:116402797 236.498