Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00328 ATGAAGACAGCTTACATTCTTCTTATGGCAAGATGGGATTGCTTGAAAAGAATGATGTATAAAAGCCTCCAAAAGAGGTTGAGTTGGGTAGAGTTGGTTGCATCAACTTTGATCAAAATCTTCAAATGGGAATATCTTGAGGTAAAAAGTGGAGATTCCATTTGCTATAAAGAAAACTGGTACGGATTGTTCCTTTGCCTTTCATTCTCTGTCTATACATTCAATATGGATATTCTTAAGATATTGGTGTTTGTAATATTTGGTGTGTTTTTGTTTGGAATTGAAGGCTTAGGCGATGATGGACTTTTGGTTTTTGACTACTACAAAGAAACATGCCCCTTTGTTGAAGATATTATCCGACGACAAGTCGAGATTGCCGTGCTCAAAGATCCTCGAATGGCTGCTTCACTCCTTCGCTTGCATTTCCATGATTGTTTTGTTATGGGATGTGATGCATCAATTCTTCTAGATAGTAATGATGAGATGGTGAGCGAAAAACAAGCGGCTCCAAATTTGAACTCCCTTCGTGGTTTCGATGTTATCGATGAGATAAAATACATATTGGAAGATGCTTGTCCTTACACTGTGTCTTGTGCTGATATCTTAACCATTGCTGCTCGTGATGCTGTTGAGCTCAAGAGAGGAGGACCTGGATGGCAAGTGCTGTTGGGGAGGAAGGACTCTCTGAAAGCGAGCTTTGATGGAGCCAACAAATACATTCCTTCTCCCAATTCCTCTCTTGATACCCTAATTGCCAATTTTCATGAACAGGGCCTTGATGTTTATGACTTAGTTGCCCTATCAGAATGGTCATTATGCAAAGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTCAGGCAAAGAGCATACCAAACGAGCCCGGAAGAAGAATACGACAGATACGAGAGATACAACACTTACCGAAGAGTCCTAAGGTCCATATGCCCCGAAACGGGGCAAGACCAGAGGGTAGCGCCCTTAGATTTTAGGACACCGGCAAGGTTTGACAACCACTATTTCCTCAACATTCTTGAAGGGAAAGCCCTTTTGGGGTCCGACAATGTGCTCATAACCCAAGACCATGAAGGTGAGATCACAAGACAAGTTTGGAGCTATGCCTCTGACCAAACCCTTTTCTTTGCTTCCTTTGTTAAGTCCATTGTCAAGATGGGGAACATCAACGTCCTCACTGCCAATCTCGGTGAAGTCCGAACCAATTGTAGGTTTACCAATCACTAG 1245 42.57 MKTAYILLMARWDCLKRMMYKSLQKRLSWVELVASTLIKIFKWEYLEVKSGDSICYKENWYGLFLCLSFSVYTFNMDILKILVFVIFGVFLFGIEGLGDDGLLVFDYYKETCPFVEDIIRRQVEIAVLKDPRMAASLLRLHFHDCFVMGCDASILLDSNDEMVSEKQAAPNLNSLRGFDVIDEIKYILEDACPYTVSCADILTIAARDAVELKRGGPGWQVLLGRKDSLKASFDGANKYIPSPNSSLDTLIANFHEQGLDVYDLVALSEWSLCKGSHTIGKARCLSFRQRAYQTSPEEEYDRYERYNTYRRVLRSICPETGQDQRVAPLDFRTPARFDNHYFLNILEGKALLGSDNVLITQDHEGEITRQVWSYASDQTLFFASFVKSIVKMGNINVLTANLGEVRTNCRFTNH 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5167788 5170271 + Carg28050-RA Car19g00328 167295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00328 414 ProSitePatterns Peroxidases active site signature. 134 145 IPR019794 GO:0004601
Car19g00328 414 Pfam Peroxidase 120 368 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car19g00328 414 ProSiteProfiles Plant heme peroxidase family profile. 102 413 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00711 Car-Chr4:4118510 Car19g00328 Car-Chr19:5167788 6.20E-66 dispersed
Car08g01155 Car-Chr8:7755681 Car19g00328 Car-Chr19:5167788 1.34E-97 dispersed
Car16g00669 Car-Chr16:4236763 Car19g00328 Car-Chr19:5167788 4.06E-107 dispersed
Car19g00328 Car-Chr19:5167788 Car03g00891 Car-Chr3:7086082 1.33E-84 dispersed
Car19g00320 Car-Chr19:5009873 Car19g00328 Car-Chr19:5167788 1.05E-101 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00328 K00430 - csv:101207771 520.776