Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00389 ATGTCTAATTCACTCAACCCTCCACCACTTCCCGCCGGCAAACACTCCGGCCGCCCCCCTTCTCTGGTGGGTCTCCGCCACTGCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCTGTTCACTTTCTCTCTCCCATGGCGATGAACTTCAGCCACTTTTGGACCTCAAGTCCGCCCTCCACAACAACTCAACCTCCATGGCTCTTAGTTCTTGGGTAAGAGGGAAAGATGTTTGCAGCAGCTTCCATGGCATTGTCTGTGATTCCAATGGCTTTGTTGTGGAAATCAATCTCTCTGCTCATAACTTATCTGGGATTCTTCCTTTTCATTCCATTTGTTCTTTGCAGTCTCTTGAGAAGCTCTCTTTTGGGGGTAATTTTTTGTATGGGACAGTCAGTAATGCCTTGAGGAACTGTTCCATGTTGAAGTATTTGGATTTGGGACAGAATTTCTTTACTGGTGAAGTGCCTGATTTGTCTTCTTTGGAGAGATTAAGGTTCTTGAATTTGAATAACAGTGGTTTTTCTGGAGATTTTCCTTGGAAATCTCTTCTGAATCTTACTGATTTGGAGTTCTTGAGCCTTGGAGATAATTCATTTAACCCAACAACTTCATTCCCATCAGAGATTATTGAGCTTAACAAGCTTTATTGGCTTTACCTCTCTAACTGCAGCATTCATGGAGAAATCCCACCTGGGATTGGGAACCTCTCTCTGCTTGAGAATCTTGAGCTCTCACAAAATGAACTTACAGGTGAAATTCCTTCTCAGATTGTGAATCTCAAGAGGCTATGGCAGCTGGAGTTACACGAGAATTCCTTAACCGGGAAGCTTCCGATCGGGTTCGGTAACCTCACTGGACTGAGGAAATTTGATGCCTCTACTAATAATCTTGAAGGTGATCTTATGGAGTTGAGGTTCTTGACCAATCTGGAGTCCTTGCAGCTCTTTCAAAATCGATTTTCTGGTACGATTCCGGAGGATTTCGGGGACTTCAAGGAGCTTGTTGAACTATCTCTTTACCAGAACAAGCTCACTGGCAGCCTGCCTCAAAGAATTGGATCTTGGGCAGCCTTCCTTTTCATTGATGTTTCAGAGAATTTCTTATCTGGACCTATACCTCCAGACATGTGCAAGCAGGGCAGTATGACTGTTCTCCTGATGCTGCAAAACAACTTCAGTGGTGGAATCCCAGAAAGCTATATGAACTGTAAATCTTTGAAGCGTTTTCGTGTAAGCAATAACTCTCTTTCGGGTGTCGTTCCTGCTGGGATTTGGAGTCTGCCGAATCTTAGCATCATTGATCTTTCAATGAATCAGTTCGATGGTCCGGTGACTTCCGATATCGGTAAAGCAAAAGCTCTTGCCCAGTTATTCTTATCGAACAACCGATTTTCTGGAAGACTACCGGCCGAGCTTGGCGAAGTATCGTCCTTAGTCTCGATCCAGATCGATTTGAACCAATTTGTTGGTCCAATACCAGAATCACTTGGCAAGTTGAAGGTCTTAGACAGCCTTTCTTTGAACAACAACAAGTTTTCAGACAACATACCTAGCTCATTAGGCTCTTGCAGTTCTCTTTCTACCATAGATCTGTCTATGAATTCGTTCTCCGGGCATATTCCAGAGAATCTTGGATATCTGCCAATTCTAAACTCCTTGAATCTGTCGAACAACGAACTTTCAGGCGAAATTCCAACTAGTTTTTCGCAGCTGAAGCTAAGCAGTTTCGACCTGTCTAATAACAGGTTAAGTGGCCAAGTACCTGAATCACTAGCAATCCAAGCCTTCGAAGAAAGTTTCATGAGAAATCCAGGCTTGTGCAGTGAGTCTATTAGATACTTGAGTTCATGTTCATCAACTTCTAGACCATCCAGCCACATCAGGTCGTTGCTGTCATGTACCATTGCTGGAATTCTAGTGTTGCTGCTCATGTCCTTCTTGTGCTTGTTGTTTGTTAAATCGAAACGTAACAATGCTAAGCATTTACTGAAATCCCGATCGTGGGATATGAAGCCATTCCACATAGTTTGCTTCACGGAAAAGGAAATCATTGATTCAATCAATTCTCACAACTTGATAGGCAAAGGAGGGTCTGGAAATGTGTACAAAGTTGTATTAAGTAATGGAAAAGAGCTCGCCGTGAAACATATATGGCAGTCGAGCTCCATCGACCAAACAAATTGTCAAACCAGTGCAACCATCTTAACCAAAAGGAAGATCAGGTCATCTGAATATGACGCAGAAGTAGCTACATTGAGTTCAGTGAGACATGTCAATGTAGTGAAATTATACTGTAGCATTTCGAGCGAGGATAGTAACCTGTTGGTTTATGAGTACTTACCGAATGGAAGTTTATGGGATCAGCTGCATACTAGCAGAAAGATTGAGATGGGATGGCAGATAAGGTACGAGGTTGCGGTTGGAGCAGCAAGAGGACTCGAATATTTGCATCATGGGTGCGACCGACCCGTGATTCACCGTGATGTGAAGTCGAGCAATATTTTATTAGACAGTGATTGGAAACCTAGGATAGCAGATTTCGGGTTAGCCAAGATTCTGCAAGATGCCTGTGGGGGTGGAGATTCTTCTCATGTCATAGCAGGAACACTCGGCTACATAGCCCCAGAATATGCATACACGTGCAAGATAAACGAGAAGAGCGACGTTTACAGCTTCGGAGTGGTCCTAATGGAACTAGTAACAGGAAGGAAGCCCAATGAGCCAGAGTTTGGGGAGAACAAAGACATTGTACAATGGGCACACAGCAGAATGAGAGACCTAAAAGGCAATCTGAAAGATATGGTAGATCCTAGCATCTCAGAGGTTCAAGTGGAAGATGCAATCAAAGTGTTACGAATCGCACTTCGCTGCACGGCTAAGACTCCGTCTACAAGGCCCTCCATGAGAATGGTAGTTCATATGCTTGAAGAAGCTGAACCTTGTAACTTTATTGACATTGTTGTCAAGAAAGAATGTGCAAAGTAA 2988 43.78 MSNSLNPPPLPAGKHSGRPPSLVGLRHCLLLLLLLLLLLCSLSLSHGDELQPLLDLKSALHNNSTSMALSSWVRGKDVCSSFHGIVCDSNGFVVEINLSAHNLSGILPFHSICSLQSLEKLSFGGNFLYGTVSNALRNCSMLKYLDLGQNFFTGEVPDLSSLERLRFLNLNNSGFSGDFPWKSLLNLTDLEFLSLGDNSFNPTTSFPSEIIELNKLYWLYLSNCSIHGEIPPGIGNLSLLENLELSQNELTGEIPSQIVNLKRLWQLELHENSLTGKLPIGFGNLTGLRKFDASTNNLEGDLMELRFLTNLESLQLFQNRFSGTIPEDFGDFKELVELSLYQNKLTGSLPQRIGSWAAFLFIDVSENFLSGPIPPDMCKQGSMTVLLMLQNNFSGGIPESYMNCKSLKRFRVSNNSLSGVVPAGIWSLPNLSIIDLSMNQFDGPVTSDIGKAKALAQLFLSNNRFSGRLPAELGEVSSLVSIQIDLNQFVGPIPESLGKLKVLDSLSLNNNKFSDNIPSSLGSCSSLSTIDLSMNSFSGHIPENLGYLPILNSLNLSNNELSGEIPTSFSQLKLSSFDLSNNRLSGQVPESLAIQAFEESFMRNPGLCSESIRYLSSCSSTSRPSSHIRSLLSCTIAGILVLLLMSFLCLLFVKSKRNNAKHLLKSRSWDMKPFHIVCFTEKEIIDSINSHNLIGKGGSGNVYKVVLSNGKELAVKHIWQSSSIDQTNCQTSATILTKRKIRSSEYDAEVATLSSVRHVNVVKLYCSISSEDSNLLVYEYLPNGSLWDQLHTSRKIEMGWQIRYEVAVGAARGLEYLHHGCDRPVIHRDVKSSNILLDSDWKPRIADFGLAKILQDACGGGDSSHVIAGTLGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGRKPNEPEFGENKDIVQWAHSRMRDLKGNLKDMVDPSISEVQVEDAIKVLRIALRCTAKTPSTRPSMRMVVHMLEEAEPCNFIDIVVKKECAK 995
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5706454 5709727 + Carg16310-RA Car19g00389 167356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00389 995 ProSiteProfiles Protein kinase domain profile. 688 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00389 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Car19g00389 995 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Car19g00389 995 Pfam Protein kinase domain 691 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00389 995 Pfam Leucine rich repeat N-terminal domain 47 88 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00542 Car-Chr9:3080351 Car19g00389 Car-Chr19:5706454 0 dispersed
Car12g00210 Car-Chr12:1325059 Car19g00389 Car-Chr19:5706454 6.77E-136 dispersed
Car13g00509 Car-Chr13:7177936 Car19g00389 Car-Chr19:5706454 0 dispersed
Car15g00514 Car-Chr15:2785649 Car19g00389 Car-Chr19:5706454 0 dispersed
Car18g00370 Car-Chr18:2281232 Car19g00389 Car-Chr19:5706454 0 dispersed
Car19g00389 Car-Chr19:5706454 Car05g00517 Car-Chr5:3004746 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89561 PF00069 Pkinase 3.50E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00389 - - cmos:111455011 1910.96