Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00422 ATGTTGAGGTCGTGTTGTAGGCCGCTCGAGCGGTTTATTGGACGGTGGGCCGGCGATGGGCTGCTGTGGCAGTCGGAATTGAAGGCTCATGCTTCTGGTGATTATTCGATCGCTGTTGTGCAGGCTAATTCCTGTCTTGAGGATCAGAGTCAGGTGTTCACGTCTTCCTCTGCTACGTATGTTGGTGTTTATGATGGCCATGGCGGCCCTGAGGCTTCTCGCTTTGTGAATAAGCATCTTTTTCCTTATATGCACAAGTTTGCTTCAGAACAAGGTGGGCTATCGGAGGATGTTATTAAGAAGGCATTCAATGCCACAGAAGAGGAGTGCAATTTCGAATATACGAAGCTATACGTAGCGAATCTCGGGGATTCGAGAGCTGTGCTTGGCCGTAGAGTTTCGGAGAGTAAGAGAACACCGGTAGTCGCAGAACGGTTGTCGACTGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATGTAGTTGTCTATACCCGTGGTGTTTGGAGGATCAAAGGCATAATTCAGGTTTCAAGATCTATAGGTGACGTCTATCTAAAGAAACCCGAATTCAACCGGGATCCAATATTCCAACAATTCGGGAACCCCGTTCCATTGAAGCGAGCAGTAATGACCGCAGAACCTTCAATCCTAACTCGAGAGCTTAAACCTCAAGACCTGTTCCTGATCTTTGCATCAGATGGCCTCTGGGAACAACTTACTGATGAGGCTGCTGTGGAGATAGTTTCCAAGAACCCAAGAGCAGGAATTGCAAAGAGATTAGTTCGTGCAGCCCTCCACGAGGCAGCAAGGAAACGGGAGATGAGATACACCGACTTAAAGAAGATCGAAAAGGGGATTCGGCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAACATAAGCTCACACACCCGTGGAGCTAAGAACGCTATTGCCGGGTACACTACTGCACCTGTTGATATTTTCTCTCTTAACTCAAACTATGAGGCAGAGGAAAAACTTCACACATAG 1059 47.4 MLRSCCRPLERFIGRWAGDGLLWQSELKAHASGDYSIAVVQANSCLEDQSQVFTSSSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEECNFEYTKLYVANLGDSRAVLGRRVSESKRTPVVAERLSTDHNVGVDEVRKEVVALHPDDSHVVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRAVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVSKNPRAGIAKRLVRAALHEAARKREMRYTDLKKIEKGIRRHFHDDITVIVVYLDHNISSHTRGAKNAIAGYTTAPVDIFSLNSNYEAEEKLHT 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6051801 6054925 + Carg16344-RA Car19g00422 167389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00422 352 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Car19g00422 352 ProSiteProfiles PPM-type phosphatase domain profile. 34 312 IPR001932 -
Car19g00422 352 Pfam Protein phosphatase 2C 114 280 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01133 Car19g00422 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00422 Car-Chr19:6051801 Car20g00642 Car-Chr20:3616045 3.28E-125 dispersed
Car11g01133 Car-Chr11:9040311 Car19g00422 Car-Chr19:6051801 0 wgd
Car19g00422 Car-Chr19:6051801 Car07g00667 Car-Chr7:3388579 2.00E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00422 - K01102 csv:101216862 620.157