Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00455 ATGGGTATGTTTTCAAAGCCAAAAATCTGTAGAACAGGAACGACCCATAATGATTCGATGGGTTTTAATGGGGTTTCTCCAGCAAGCAAGTGGAAATGGACCCATTTCTTGCCTCTGTTTGTAGCGATGGTGGTCATAGCAGAGTTCGCTTCTCTAAGTCGGCTCGACATCGCGAAAAATGCGGCTATGGTGGACTCTTGGGTCGACTTATTCTATGGGCCTCCGCCTTTGCACGAAGAAATCGAAGATGTTAGCACTGGAATCACAATTGATGGAGTAATGGGTAGAGTTAACTGTGAGGAGTGGCTGGAGAAGGTGGATGCGGTGGAGTACTCTAGGGACTTCAAAAGGAAACCTGTTTTGGTTTCTGGGTCCGAGAAGGATTGGAAAACTTGTGATGTGGGATGCCAGTTTGGATTGAATCCTGGTGAGCAGCCTGATGCTGCATTGGGATCACCTCAACAAGGTCGTGTTGCTAGCGTCCTTCGGTCGATGGAATCGTCGCATTACTATCCAGAGAACAATATTGATTTGGCAAGACGGAAGGGTTACACTGTGGTTATGACCACTAGTCTTTCATCAGACGTTCCTGTTGGATATTTTTCGTGGGCAGAATACGACATAATGGCACCAGTGCAACCAAAGACGGAGCCTGCCCTTGCAGCTGCCTTCATTTCGAATTGTGGCGCCCGCAACTTTCGTTTGCAAGCTCTTGAAGCACTTGAGAAATTGGATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCGCGATGGAAGAGTTGACAAAGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTCGAGAATTCCAATGAGGAAGATTATGTCACAGAAAAGTTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTGGGTACTCCAAATATAAAGGAGTTTGCTCCTTCTCCTGATTCATATTTGCATATCAAGGAAATTTCCGATGTCGAGTCGGTTGCCAAGTCCATGAAACACCTCGCAGAGAATCCCAAAATGTACAATCAATCACTAAGATGGAAGTACGATGGTCCATCCGATTCGTTCAAGGCCCTTGTCGATATGGCAGCAGTACACTCATCGTGTCGCCTTTGCATCCATTTGGCAACCATCATCCACGAGAAAGAAGAAACCAGTCCCGAGTTCAAGAAACGACCGTGCAAGTGCTCTCGTGGCTCCGAAACGGTTTATCATTTATACGTAAGGGAGAGAGGGCGGTTCGAAATGCAATCCATTTTCTTGAGGTCGGGAAATTTAACGTTGGAGGCTTTAGAATCGAGAGTACTCGAAAAGTTCAAGTCTTTGAAACATGTCCCAATTTGGAAGCAAGAACGACCTGAAAGCTTAAGAGGAGGAGATGAACTTAAGCTATATAGGATATATCCAGTTGGGTTGACACAGAAGCAGGCTTTATATACCTTCAGATTCAAAGGTAATGATGATTTCAAAACTCACATAGAAACACACCCTTGTGCTAAGATGGAAATCATATTTGTCTGA 1530 44.84 MGMFSKPKICRTGTTHNDSMGFNGVSPASKWKWTHFLPLFVAMVVIAEFASLSRLDIAKNAAMVDSWVDLFYGPPPLHEEIEDVSTGITIDGVMGRVNCEEWLEKVDAVEYSRDFKRKPVLVSGSEKDWKTCDVGCQFGLNPGEQPDAALGSPQQGRVASVLRSMESSHYYPENNIDLARRKGYTVVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEPALAAAFISNCGARNFRLQALEALEKLDVKIDSYGSCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGTPNIKEFAPSPDSYLHIKEISDVESVAKSMKHLAENPKMYNQSLRWKYDGPSDSFKALVDMAAVHSSCRLCIHLATIIHEKEETSPEFKKRPCKCSRGSETVYHLYVRERGRFEMQSIFLRSGNLTLEALESRVLEKFKSLKHVPIWKQERPESLRGGDELKLYRIYPVGLTQKQALYTFRFKGNDDFKTHIETHPCAKMEIIFV 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6263774 6270012 + Carg22069-RA Car19g00455 167422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00455 509 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 381 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00318 Car-Chr16:1954005 Car19g00455 Car-Chr19:6263774 0 wgd
Car19g00455 Car-Chr19:6263774 Car04g00457 Car-Chr4:2592261 1.01E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00455 K00753 - csv:101205170 909.827