Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car19g00457 | ATGGCGTCCACCAACAACGCACAAGAAAACCAGAACCAAGCCGGAAGGCACCAGGAAGTCGGCCACAAGAGCCTCTTGCAGAGCGATGCTCTGTATCAGTACATTCTTGAGACGAGCGTTTATCCAAGAGAGCCTGAATCGATGAAGGAATTGAGAGAATTGACTGCCAAACATCCATGGAACATCATGACTACATCGGCGGACGAAGGACAGTTCTTAAACATGCTTTTGAAACTAATTAATGCGAAGAAAACGATGGAGATTGGAGTATACACTGGCTACTCTCTTCTCGCTACAGCCCTAGCACTTCCGGAAGACGGACAGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTCGGTTTACCGGTGATTGAGAAAGCCGGCGTTGCTCACAAGATC | 405 | 47.16 | MASTNNAQENQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGQILAMDINRENYELGLPVIEKAGVAHKI | 135 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 6278605 | 6279339 | + | Carg22067-RA | Car19g00457 | 167424 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car19g00457 | 135 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 24 | 135 | IPR002935 | GO:0008171 | |
| Car19g00457 | 135 | Pfam | O-methyltransferase | 37 | 135 | IPR002935 | GO:0008171 | |
| Car19g00457 | 135 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Car19g00457 | 135 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g00598 | Car-Chr4:3420061 | Car19g00457 | Car-Chr19:6278605 | 7.28E-23 | transposed | |
| Car11g01090 | Car-Chr11:8560992 | Car19g00457 | Car-Chr19:6278605 | 2.98E-59 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car19g00457 | K00588 | - | csv:101205648 | 259.996 |