Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00458 ATGGAGGCTCTCTCTGTTCCTCTCTACATTATAATACCTCTCTTTCTTTTAGCTTTCTTTTCCATTTCATTTCTAAAGAGAAATGAAAAGCCAAAAGCCCAAGAAGCTCTTAAGCTTCCTCCTGGTTCCATGGGTCTGCCATGGTTTGGAGAAACTCTGCAGCTTTATTCTCAAGATCCCAACATATTTTTCTCAGAAAAACAGAGGAGATTTGGAGAGATTTTTAAGACCAATATTTTGGGATGTCCTTGTGTGATGTTGGCAAGCGCCGCCGCTGCCCGGTTTGTTTTGGTGACCAACGCCCATTTATTCCGGCCGACTTACCCTAAAAGCAAGGAGACTCTGATCGGTCCGGCGGCGCTTTTCTTCCATCAGGGTAACTACCATTCTAACCTCAGGAAGCTTGTTCAAAATTCTCTCTGTCTTGAACGCCTCAGAACTACTCTTGTTCCTCGTATTGAAGCCGCCGCCATTTCCGCCGTCGATTCTTGGGCCGCCACCGGCCATGTCGTCAATACCTTCCTTCAAATGAAAAAGTTCTCTTTCGAGGTAGCGATTGTGGCCGTGTTTGGTCAGCTAGAAACTCACTACAGCGAGAAGCTGAAAGAAAATTACTGCATATTAGACAAAGGCTACAACTCTTTTCCGACCAGATTACCAGGAACAGCATATTCAAAAGCATTATCAGCGAGGAAGAAGCTGAGAGAGATTCTGAGAGAGATAATTGAGGAGCGGAGAGAAAAAGGGGCGGCGGAGAGAGATTTTGTGGGTCAGCTTTTGAGCTACAGAGATGAAAATGGAGAGAGATTGAGTGAGGAACAGATCGCCGACAACGTCATCGGAGTTCTGTTTGCGGCACAGGACACGACGGCGAGTGTTCTGACATGGATTTTGAAGTATCTTCACGACAGTTTGAAGCTGTTTGAGGCTGTGAGGGCTGAGCAGATGGAAATTTATAGAAGAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAGATTAAGGACATGCCCTTTACTCATAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCCTTCACTTTTAGGGAGGCAGTGGTTGACGTGGAATATAAAGGGTACCTTATACCAAAGGGATGGAAGGTCATGCCCTTGTTTAGGAATATTCATCACAACCACGACTACTTCAATGATCCTCATACGTTCGATCCCTCTAGATTTGAGGTGGCTCCACGACCCAATACGTTCATGCCATTTGGTAATGGAGTACATTCTTGCCCGGGGAACGAACTTGCCAAGCTAGAGATCCTCATCTTACTTCATCACCTCGTGACCAAATTTAGGTGGGAAGTTGTGGGACCACAGAGCCGGGTTCAATATGGACCATTCCCAGTGCCTGTCCACGGGCTACCGGCCAGATTTTTCAAACAAACAACAACCAACCAATAG 1437 46.21 MEALSVPLYIIIPLFLLAFFSISFLKRNEKPKAQEALKLPPGSMGLPWFGETLQLYSQDPNIFFSEKQRRFGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETLIGPAALFFHQGNYHSNLRKLVQNSLCLERLRTTLVPRIEAAAISAVDSWAATGHVVNTFLQMKKFSFEVAIVAVFGQLETHYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILREIIEERREKGAAERDFVGQLLSYRDENGERLSEEQIADNVIGVLFAAQDTTASVLTWILKYLHDSLKLFEAVRAEQMEIYRRNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHDYFNDPHTFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLVTKFRWEVVGPQSRVQYGPFPVPVHGLPARFFKQTTTNQ 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6287688 6291530 + Carg22066-RA Car19g00458 167425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00458 478 Pfam Cytochrome P450 40 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car19g00458 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Car19g00458 478 Coils Coil 227 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00453 Car-Chr16:2884958 Car19g00458 Car-Chr19:6287688 6.72E-179 dispersed
Car19g00458 Car-Chr19:6287688 Car04g01049 Car-Chr4:6014161 8.79E-86 dispersed
Car01g01434 Car-Chr1:12370923 Car19g00458 Car-Chr19:6287688 0 wgd
Car11g01089 Car-Chr11:8536333 Car19g00458 Car-Chr19:6287688 0 wgd
Car19g00458 Car-Chr19:6287688 Car05g00156 Car-Chr5:812842 1.92E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00458 K09843 - csv:101219389 816.609