Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00463 ATGGTGGAATCGAACTTGACTTACGAGGAATGCCGACGCCAGAGGTTGGAGGAGAATAAGAAGAGGATGGAAGAGCTTAATCTCAACAAGCTAGCCGATGCTCTGAAATCTTCCAGCCCTAAATCCTCTCCGACGAAGCAGCTAAAGCGTCCTCGTCAGCCACTCGATATCTCGTCCTTAAGTGTGAGAAGATCCAGCCGTTTTGCGGATAAGCCCCCTCCAAGCTATAAGGAGGAGCCCATTGAACCACTTGCAGGTTTAAGAAGGACTTATCAAAGGAGGGATTTGTTGAATCGGGTTTATGCTTCAGATGTGGAAAGGCAATATGCCATTGACAGAGCACGAGACCTTCAATCTAGCCTAGAATCTAGATACCCAAGTTTTGTGAAGCCCATGCTTCAATCACACGTCACCGGGGGATTTTGGCTGGGTCTTCCAGTTCATTTTTGCAAGGCACACCTTCCCCTTGAGGATGAAATGTTAACTCTGGTGGACGAGGATGAAAATGAGTTCCAAACGAAGTACCTTGCCGAAAAAACAGGTCTTAGTGGTGGTTGGAGAGGGTTTTCCATTGATCACCAGTTAGTCGATGGGGATACTTTGGTGTTTCAGTTAACTAAGCCGACTGAATTCAAGGTGTATATCATCAGGGCATACAATTTAGAAGACAAAGAAAACACCCATGAGGATTCTGATGTCACCCAATTGGAAAGTAATGGCAAAAGAAATACTGGATCAGGTAAAGGAGATAACGGCGAGGATTCAAATGTATCCCCTTTGGAAAAAAGTGGCAAAAAGGTTACTAGATCATCAGGGCGTAAAACCAGGGCAAATAAATCTGAAGATAAAGCAGCTAACGGCGAGGATTCCGGTGTCTCCCAGTTGGAAACAAGTGGCAAAAGAACTACAAGATCAGCAAGTAGAGGGAAAAAGTAG 936 45.09 MVESNLTYEECRRQRLEENKKRMEELNLNKLADALKSSSPKSSPTKQLKRPRQPLDISSLSVRRSSRFADKPPPSYKEEPIEPLAGLRRTYQRRDLLNRVYASDVERQYAIDRARDLQSSLESRYPSFVKPMLQSHVTGGFWLGLPVHFCKAHLPLEDEMLTLVDEDENEFQTKYLAEKTGLSGGWRGFSIDHQLVDGDTLVFQLTKPTEFKVYIIRAYNLEDKENTHEDSDVTQLESNGKRNTGSGKGDNGEDSNVSPLEKSGKKVTRSSGRKTRANKSEDKAANGEDSGVSQLETSGKRTTRSASRGKK 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6314735 6317688 - Carg22061-RA Car19g00463 167430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00463 311 MobiDBLite consensus disorder prediction 237 265 - -
Car19g00463 311 MobiDBLite consensus disorder prediction 31 83 - -
Car19g00463 311 Coils Coil 6 33 - -
Car19g00463 311 MobiDBLite consensus disorder prediction 32 65 - -
Car19g00463 311 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Car19g00463 311 MobiDBLite consensus disorder prediction 226 311 - -
Car19g00463 311 Pfam B3 DNA binding domain 128 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00378 Car-Chr11:2074794 Car19g00463 Car-Chr19:6314735 9.01E-70 dispersed
Car19g00463 Car-Chr19:6314735 Car09g00166 Car-Chr9:827345 1.18E-08 dispersed
Car12g00498 Car-Chr12:3133682 Car19g00463 Car-Chr19:6314735 9.18E-68 wgd
Car18g01201 Car-Chr18:11602215 Car19g00463 Car-Chr19:6314735 1.20E-159 wgd
Car19g00463 Car-Chr19:6314735 Car04g00470 Car-Chr4:2661912 4.08E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5272 PF02362 B3 1.40E-15 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00463 - - cmax:111471078 589.726