Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00506 ATGGCGGTTTCCGGTAGCAATTCGACCCAGATTCATCCCTCCGACGAATCTTCCTCCAGTTCTTCCGAGAGTTCACTATCCAACTTGAAAGTCTACGCTGCGATCGGTATAATTACTGCATGTGTGATTGCAGCGGCTGCTCTGATCTTCCTCTGTATCCGTAAAAATAGGGACTCGAGGAAGCACAAAATGCGGGTGAAGCATAGTTCCGGATTAATTCCGTTGTTCTCAAAGGAGATCGCCGAGATCAATGAGTCCGATCGGAGTGTGGATTGCGAGAAAGGGGAAGTCATTAGGGTTGAGAATAAGAAGGAAACTGAGTTCGAGACTGGAGTAGGTAAGAAGAGTCAAGAGAGCGACGTGTCCGGCGGCGGTCGAAGCGATGTGCCGGTGGAGGATCAGAACTTAGGGTGGGGACGGTGGTACACCTTGAAGGAACTCGAAATGGCAACCAATGGGTTTCTGGAAGAGAATGTGATCGGAGAAGGAGGCTACGGCATCGTGTACAGAGGCGTTTCGCCGGACGGCTCCGTCGTCGCCGTGAAGAATCTTCTTAACAACAAGGGTCAAGCAGAGAAAGAGTTCCAGGTTGAAGTAGAGGCCATTGGAAAAGTAAGGCACAAGAACTTGGTGGGTCTGATGGGTTATTGTGCAGAAGGAACACAGAGGATGCTTGTGTATGAATTTGTTGATAATGGCAACTTGGAGCAATGGTTACATGGTGATGTGGGGCCTGTTAGCCCTCTAACATGGGATATTAGGATGAAAATTGCCCTTGGAACAGCAAAAGGTTTGGCCTATTTGCACGAGGGTTTAGAACCGAAAGTTGTGCACCGTGATATAAAATCTAGCAACATTCTCTTAGATAGAAAATGGAATGCGAAAGTGTCTGATTTTGGACTGGCGAAGCTCTTACAACCTGAAGCGAGCTATGTAACTACTCGTGTAATGGGGACCTTTGGATATGTTTCCCCTGAGTATGCAAGTACAGGCATGCTTAACGAGGGGAGTGATGTATATAGTTTCGGAGTTCTACTTATGGAGATAATTACTGGCCGAAGCCCAATCGACTATTCCAGGCCTCCAGGAGAGATGAACTTGGTGGACTGGTTTAAAGGAATGGTGGCGAATCGACGTGGCGAAGAGGTTGTCGATCCATTGATTGAGAATCCACCCCCTCCAAGAACTCTAAAGCGAATGTTGCTTGTTTGTCTACGCTGCATCGACTTGGATGCCACTAAAAGGCCAAAGATGGGGCAAATCGTTCATATGATAGAGGCAGACGACTTTCCTTATCGTTCGGAGCTTCGATCCGTGCGAGAGAAAGATAACCAGCCTTCTAGCTTAGACGTGCCGAGTAAACTTCCAATGAAGCATGCTGGAACATAG 1389 47.73 MAVSGSNSTQIHPSDESSSSSSESSLSNLKVYAAIGIITACVIAAAALIFLCIRKNRDSRKHKMRVKHSSGLIPLFSKEIAEINESDRSVDCEKGEVIRVENKKETEFETGVGKKSQESDVSGGGRSDVPVEDQNLGWGRWYTLKELEMATNGFLEENVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEKEFQVEVEAIGKVRHKNLVGLMGYCAEGTQRMLVYEFVDNGNLEQWLHGDVGPVSPLTWDIRMKIALGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRKWNAKVSDFGLAKLLQPEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVVDPLIENPPPPRTLKRMLLVCLRCIDLDATKRPKMGQIVHMIEADDFPYRSELRSVREKDNQPSSLDVPSKLPMKHAGT 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6726105 6729664 - Carg19414-RA Car19g00506 167473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00506 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Car19g00506 462 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Car19g00506 462 ProSiteProfiles Protein kinase domain profile. 154 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00506 462 Pfam Protein kinase domain 156 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00506 462 MobiDBLite consensus disorder prediction 1 23 - -
Car19g00506 462 MobiDBLite consensus disorder prediction 108 127 - -
Car19g00506 462 MobiDBLite consensus disorder prediction 438 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00916 Car-Chr6:7070802 Car19g00506 Car-Chr19:6726105 4.63E-178 dispersed
Car11g01646 Car-Chr11:12954273 Car19g00506 Car-Chr19:6726105 1.30E-153 dispersed
Car19g00506 Car-Chr19:6726105 Car20g00227 Car-Chr20:1307189 8.88E-153 dispersed
Car11g00931 Car-Chr11:5941496 Car19g00506 Car-Chr19:6726105 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89563 PF00069 Pkinase 4.00E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00506 - - csv:101219201 846.654