Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00527 ATGGGCGATACCCGAGGTGGTTGCTGTCCATCCATGGATCTGTTCCGCTCCGAGCCGATGCAGCTGGTGCAGCTCATCATTCCCATCGAGTCTGCGCATCGCACTATCTCCTACCTTGGTGATCTCGGCCTTCTCCAATTCAAAGATCTCAATGCCGAAAAAAGCCCGTTCCAGCGTACTTATGCTGCACAGATCAAAAGATGTGGAGAGATGGCACGCAAATTGAATTTTTTCAAGGAACAAATGTTGAAGGCTGGGTTGCCAAGCAAAAGCTCCATTTCACAAGTTGATATCAACATAGATGACCTTGAGGTCAAACTTGGTGAGCTTGAGGCAGAACTGATTGAGATAAATGCTAATAGTGAGAAGCTACAGCGTTCCTACAATGAACTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGACTTTTTCGGTGCAGCGCAAAGCAGTGCCATAGAGCAGCAAAGAGAGTTTGAATCAAGACGAGTTGGTGGAGATTCAATAGACGTTCCATTGTTGTTGGAACAAGAATCATCTGTGGATCAGTCAAAGCCAGTTAACTTGGGATTTCTTTCTGGTCTTGTTCCTCGGGGAAAATCTATGGCATTTGAGAGGATACTTTTTCGTGCTACCAGGGGTAATGTGTTTCTGAAGCAGGCTGTAGTTGAGGATCCTGTTCCAGATCCTATCTCTGGAGAGAAGGTTGAGAAAAACGTGTTTGTTGTTTTCTATTCTGGAGAAAGAGCAAAGAATAAGATTCTAAAAATATGTGAGGCGTTTGGAGCAAATCGATACCCTTTTACTGAGGACTTGGGGAAACAAGCCCAAATGATTGCCGAGGTTTCTGGAAAACTGGCTGAGCTGAAGACTACCATAGATGTGGGGCTGACGCACCGGGCTAATCTATTGCAGACTATTAGAGAACATTTTGAAAATTGGAATCTCTTGGCGAGGAAGGAAAAATCCATATACCATATCTTGAACATGCTTAGCCTTGACGTAACTAAACAATGTCTGGTCGCGGAGGGGTGGGGTCCTGTTTTTGCAACAAAACAGATTCAGGAAGCACTCCAGCGAGCAGCATCTGATTCCAACTCCCAAGTTGGAGCAATTTTCCAGGTTTTATTAACTACAGAAGCACCGCCTACTTATTTTCGAACAAACAAATTCTCCACTGCTTTTCAAGAAATTGTTGATGCATATGGGGTGGCAAGGTATCAAGAAGCCAATCCTGGTGTATATACCATCGTCACGTTCCCATTTCTATTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGTCTGTTACTTGCAACACTGTATTTTATATTGCGGGAAAAGAAGCTTTCCTCTCAGAAGCTTGGAGATATCACTGAAATGGCCTTTGGTGGACGCTATGTCATTTTAATGATGTCGCTATTTTCAATATACACAGGTCTAATCTATAATGAGTTCTTCTCAGTCCCATTTGAACTGTTTGGTCGCTCAGCCTATGCATGTCGTAGTCCTGATTGCAGTGATTCTACCACTGTGGGGTTGATAAAGGCGGGTTCTACGTATCCGTTTGGCTTGGATCCTGTATGGCATGGCACTCGAAGTGAGCTTCCATTTCTTAACTCTCTGAAAATGAAAATGTCTATCCTCCTTGGAGTTGCACAAATGAACCTTGGAATTATAATAAGCTATTTCAATGCTACATTTTTCAAGAACAGCATCAATATTTGGTTCCAATTCCTGCCACAAATGATATTTCTGAACAGCCTTTTCGGCTATCTTTCCCTTCTCATCATCGTAAAGTGGTGCACTGGTTCGAACGCGGATCTGTACCACGTAATGATATACATGTTTCTCGGCCCCACTGAAGATCTGGCTGAAAATCAACTTTTTCCTGGGCAGAAAAATGTTCAGATTGTGCTGCTCTTACTGGCCCTTGTTGCTGTACCATGGATGCTGCTTCCAAAGCCTTTTCTTTTGAAGAAACAGCACGAACAGAGGTTCCAAGGCCAGTCTTATGCGCCTCTTCCAAGTGGTGATGATTCCCTTGAGTTGGATTCGCATCACGATTCACATGGTCATGAGGAGTTCGAGTTCAGTGAGGTTTTTGTGCATCAACTTATACATACCATTGAATTTGTGCTTGGAGCAGTGTCAAACACAGCTTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCGCACTCAGAGTTATCGAGCGTGTTTTATGACAAGGTTCTCGTTCTATCTGCGGGGTTCAACAACATTGTAATCTTAATAGTAGGCATCATCGTTTTCATTTTCGCTACCGTTGGTGTGTTGCTGTTGATGGAGACTTTAAGTGCTTTCCTTCACGCACTGCGTCTTCATTGGGTCGAGTTCCAAAACAAGTTCTACGAGGGAGACGGCTACAAATTCCTTCCTTTCTCATTTGCATTGCTAGATGAAGATGATGAATAA 2457 43.51 MGDTRGGCCPSMDLFRSEPMQLVQLIIPIESAHRTISYLGDLGLLQFKDLNAEKSPFQRTYAAQIKRCGEMARKLNFFKEQMLKAGLPSKSSISQVDINIDDLEVKLGELEAELIEINANSEKLQRSYNELVEYKLVLQKAGDFFGAAQSSAIEQQREFESRRVGGDSIDVPLLLEQESSVDQSKPVNLGFLSGLVPRGKSMAFERILFRATRGNVFLKQAVVEDPVPDPISGEKVEKNVFVVFYSGERAKNKILKICEAFGANRYPFTEDLGKQAQMIAEVSGKLAELKTTIDVGLTHRANLLQTIREHFENWNLLARKEKSIYHILNMLSLDVTKQCLVAEGWGPVFATKQIQEALQRAASDSNSQVGAIFQVLLTTEAPPTYFRTNKFSTAFQEIVDAYGVARYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFELFGRSAYACRSPDCSDSTTVGLIKAGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFKNSINIWFQFLPQMIFLNSLFGYLSLLIIVKWCTGSNADLYHVMIYMFLGPTEDLAENQLFPGQKNVQIVLLLLALVAVPWMLLPKPFLLKKQHEQRFQGQSYAPLPSGDDSLELDSHHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLVLSAGFNNIVILIVGIIVFIFATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFLPFSFALLDEDDE 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6865119 6874291 - Carg19393-RA Car19g00527 167494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00527 818 Pfam V-type ATPase 116kDa subunit family 38 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Car19g00527 818 Coils Coil 93 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00626 Car-Chr2:4718072 Car19g00527 Car-Chr19:6865119 7.11E-70 dispersed
Car05g00231 Car-Chr5:1219756 Car19g00527 Car-Chr19:6865119 6.88E-09 dispersed
Car19g00527 Car-Chr19:6865119 Car20g00400 Car-Chr20:2255944 0 dispersed
Car11g00918 Car-Chr11:5815382 Car19g00527 Car-Chr19:6865119 0 wgd
Car12g00408 Car-Chr12:2605249 Car19g00527 Car-Chr19:6865119 0 wgd
Car19g00527 Car-Chr19:6865119 Car05g00228 Car-Chr5:1215524 2.58E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00527 K02154 - csv:101211364 1499.18