Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00528 ATGAGGCATTTCCGTGGTCGTCAGGCGTCGCAGTCTGAGGATTATCATTACGAGGGAAATACGCGAGACTATAAGAGCATTAGAGACGCGACGAGTAGACAGCAGAAGAACCCCCATGACGACGTTGGATACCTCAACAATCGATGCAGGGAAACAGGCCTTGATAAGTATACAACAGCAGATAGAACCTTGGCAGAAGAACCCACTGGGCATAAGACGAACCTGTATAGGGTACTGGAGAGTGGGGCCTTGGTTTTGAGTGACAGGGGCATATGCTGCATTGATGAATTTGATAAAATGTCTGAAAATGCAAGGAGCATGTTGCATGAGGTGATGGAGCAACAAACTGTTTCAATAGCGAAGGCTGGAATCATTGCTTCCCTTAATGCCAGAACTTCAGTATTAGCTTGTGCAAATCCTAGTGGTTCACGTTATAACCCTCGCCTATCTGTGATTGATAACATACACCTTCCTCCTACTTTGTTATCAAGGTTTGACTTGATTTATTTAATTCTGGATAAAGCTGATGAGCAAACAGATAGGCGCCTTGCTAAGCATATTGTCGCATTACACTTCGACAACCCAGAGGGCATTGAGCAGGATTTCATGGACCTTCATACCTTGACTTCATACATCAGCTATGCTAGGAAAAACATTCACCCAAAATTATCAGATGAGGCAGCTGAAGAGTTGACTAGAGGCTATGTTGAGCTGAGGAGGAGAGGAAACTTTCCAGGCAGTAGTAAAAAGGTCATAACAGCTACTCCCAGACAAATCGAGAGTTTAATACGTTTAAGCGAAGCCCTTGCTCGAATACGTTTCTCAGAATGGTTGCTGGATGAGCTGAAGAAGCAGAATCCTGATAATGAAGTCCATCTCAACAACCTTAGAAATGCGGTATCAACACTTGCAAGTGAGGGATTTGTAGCGATCCATGGTGATAGCATAAAGAGAATGTGA 960 43.96 MRHFRGRQASQSEDYHYEGNTRDYKSIRDATSRQQKNPHDDVGYLNNRCRETGLDKYTTADRTLAEEPTGHKTNLYRVLESGALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVALHFDNPEGIEQDFMDLHTLTSYISYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWLLDELKKQNPDNEVHLNNLRNAVSTLASEGFVAIHGDSIKRM 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6875084 6880931 - Carg19392-RA Car19g00528 167495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00528 319 Pfam MCM AAA-lid domain 207 277 IPR041562 -
Car19g00528 319 Coils Coil 279 299 - -
Car19g00528 319 ProSiteProfiles MCM family domain profile. 77 187 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car19g00528 319 MobiDBLite consensus disorder prediction 1 23 - -
Car19g00528 319 ProSitePatterns MCM family signature. 90 98 IPR018525 GO:0003677|GO:0005524|GO:0006260
Car19g00528 319 Pfam MCM P-loop domain 74 191 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00342 Car-Chr19:5283540 Car19g00528 Car-Chr19:6875084 5.96E-36 dispersed
Car19g00528 Car-Chr19:6875084 Car06g00301 Car-Chr6:1678624 1.11E-45 dispersed
Car11g00917 Car-Chr11:5811207 Car19g00528 Car-Chr19:6875084 7.97E-20 transposed
Car11g00916 Car-Chr11:5807542 Car19g00528 Car-Chr19:6875084 5.96E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00528 K02212 - csv:101211850 392.889