Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00547 ATGTGGCTACAGAAAGGAAACGGTGTTAATGGCGGCAAGAAGGGAGGAGCAGGCGGAGGGGGACATGGGTTGGTGGCTATTGCTATTAACAGGGAGAAAGGAAGCCAAAATGCTATCAGATGGGCCGCCGAGCATCTGCTTGGAAGGGGCCAAAATGTGGTATTAATCCATGTGGTTCAGAGACCTTCCAGTGCGGCTGCTTCTTTGATTGGGGAAGCCATTATTTGTAATAGTGATGGCGATTTCTCTGCTGATACCCCTCGGAAACAGCAGCTCGAGATGCAGACGAGGGACATTTTTCTCACCTTCCATTGCTATTGTACTCGCAAGGATATTCAATGCCTTGATGTTATATTGGAAGACACCGATGTGGTAAAAGCATTAAATGAATATGTCTCGTACGCTGCAATCGATAACCTGTTTCTCCAAAGGCTTATGATGGGAATTGGTGATTTTCATAGTAGGTTCAAGACATCGAGCGTGGGAGGTAGCGTGTCGAAAGGGGCACCAGATTTTTGCACTGTGTATGTCATCTCAAAGGGGAAGGTTTCGTCAGTGAGAAATGCGTCTCGCTCAGCTCCCTCTTTTTCTCCTCTACATGAACATTTACAGAAATTATCCAAGCCGATCGTAAAGGGAGCAATCACTCCTCGACATAAGTTTCTTCTAAGAGATAGGGCATCGTTCAAGCCTCGCACCATTCACGATGAATTAGTCAAGTCACCTATCTCTCACGGAGGAGATAGAATTTCTATCACGAAATGTAGCGGAGGGTTCTTTGAGACAGAATCCGACATATCCTTTATAAGCTCTGGCAGACCAAGCATGGATCGTACTTCTGTTGCATTCGACTACTCTGATTCAGCTCCCTCGCGATTTTCAACCAGTTCAGAGAGTAGCTTTACATCTCTACCATTTCAACCAAAATGGACAGACCTCAATAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACACCATATTCCTGGTCATCTCAGAACTTGGATGAAGCAGAACTTGAAATGAAGAGGTTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACAGCAAAGCAAAAGGCAATGGAACTGAATGATTGGAGACGTGAAGAACAACAAAAACTAGAAGAGGCACGACTTGCTCAAGAAGCAGCAATAGCTATTGCAGAGCAGGAGAGAGCGAGATGCAGAGCAGCAGTGGAAGCAGCTGATGCAGCTAAGAGAATTGCAGAGTTAGAATCACATAAAAGAGCAAATCTAGAGATGAAAGCACTTAAAGAAGCAGAGGAAATGCAGAGAGCATTGAAAAATGTTACACAAAGTGACATCAGATACAGGTTATATTCAATTGAGGAGGTTGAATCGGCAACGGAACGTTTTGCACCATCTCGGAAGATAGGAGAGGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTTGATCACACATCGGTTGCGGTCAAGGTTTTGCGTCCTGATGCATCTCAAGGGAGGAGTCAGTTTCAGCAGGAGATTGATATATTGAGTTGCATAAGACATCCCAACATGGTACTTCTTCTAGGAGCATGCCCGGAATATGGCATTCTAGTGTACGAGTACATGTCCAACGGAAGTTTGGAGGATCGACTCTTCCGAAAGGGGAACACCCCTGTTATTCCTTGGCAATTGAGGTTTCGAATTGCTGCTGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACAAAGCCAGAGCCATTAGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTGGACCACAGCTATGTTTGCAAGATAAGCGACGTCGGTTTGGCTAGGCTTTTACCTGCCGTGGCCGAGAATGTAACACAATGTTGCATGACTTCGGCCGCTGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGTTGCTTCAACTAATTACAGCCAAGCCGCCCATGGGGTTGGCTCACCAAGTCGCTCGCTCTATTGAGAAGGGGACTTTTCAAGAGTTTCTGGATCCAGCTGTGACTGATTGGCCAGTGGAACAAGCACTTACCTTTGCTAAATTAGCACTTCAATGTGCAGAACTTCGACGAAAAGACAGACCAGATCTTTGCAGTGTTGTGCTGCCAGAACTTAACAACTTGAGGGAATTTGGTGAGAAGAATATGGAGCATATGGTGTCATGGGCCATTAGTGGATCTTTGAGCGGTTTTAGCAATGCCTCAATGGAGCAGGATATAATGAGCGACCCACACCTAATGTTGACTTCAGAAAGTTCCAAGGGCCAGTCTAGTGCATCGTCACAGGCAGGAGGAGACTGA 2388 45.52 MWLQKGNGVNGGKKGGAGGGGHGLVAIAINREKGSQNAIRWAAEHLLGRGQNVVLIHVVQRPSSAAASLIGEAIICNSDGDFSADTPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDVVKALNEYVSYAAIDNLFLQRLMMGIGDFHSRFKTSSVGGSVSKGAPDFCTVYVISKGKVSSVRNASRSAPSFSPLHEHLQKLSKPIVKGAITPRHKFLLRDRASFKPRTIHDELVKSPISHGGDRISITKCSGGFFETESDISFISSGRPSMDRTSVAFDYSDSAPSRFSTSSESSFTSLPFQPKWTDLNNLNDFSSVSDESCRTPYSWSSQNLDEAELEMKRLKLELKQTMEMYSTACKEALTAKQKAMELNDWRREEQQKLEEARLAQEAAIAIAEQERARCRAAVEAADAAKRIAELESHKRANLEMKALKEAEEMQRALKNVTQSDIRYRLYSIEEVESATERFAPSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDASQGRSQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHSYVCKISDVGLARLLPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPPMGLAHQVARSIEKGTFQEFLDPAVTDWPVEQALTFAKLALQCAELRRKDRPDLCSVVLPELNNLREFGEKNMEHMVSWAISGSLSGFSNASMEQDIMSDPHLMLTSESSKGQSSASSQAGGD 795
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 7039718 7043174 - Carg19372-RA Car19g00547 167514
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car19g00547 795 Coils Coil 376 404 - -
Car19g00547 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Car19g00547 795 Coils Coil 429 449 - -
Car19g00547 795 ProSiteProfiles Protein kinase domain profile. 472 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00547 795 Coils Coil 331 358 - -
Car19g00547 795 Pfam Protein kinase domain 475 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00668 Car-Chr17:6195832 Car19g00547 Car-Chr19:7039718 0 dispersed
Car16g00601 Car-Chr16:3847962 Car19g00547 Car-Chr19:7039718 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89565 PF00069 Pkinase 1.90E-41 CL0016 Car PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00547 - - cmax:111468498 1342.41