Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00567 ATGGAGATTCCGAGCAGTTGTTCAATGGATGGTTTCTTTGATGAACTTCTGAAGGACACTCATACTTGTACTCACACGCATACTTGCAATCCACCGGGCCCTGACTACTCTCATACTCACACATGTTTTCATGTCCACACTAAGATTGTCCCTGCTCCAAGCGAAGAAGACAAGGTTGTTACTGATGACACGGCGGAATCGACCGAGAAGAAGTCGAAGAAACGGCCGTTGGGTAACCGTGAAGCTGTTCGTAAGTACCGGGAGAAGAAGAAGGCTAGGGCAGCTTCATTAGAGGACGAGGTTGTTAGATTGAGGGCTTTGAATCAGCATTTGGTGAAGAGGTTGCAGGGGCAGGCAGCACTTGAGGCTGAGGTTGCTAGGCTTAAGTGTTTGCTTGTGGATATTAGGGGCAGAATTGAAGGGGAGATTGGTTCTTTCCCATATCAGAAAGCTGTTAATCCTAACTTGGCTAATCCAAGCATCCCTGGTGCTTATTTGATGAACCCGTGTAATGTCCGGTGTGAGAATGATCAGATTTACTGCCTCCATCCAGGGGTCGATGGTAGCAGAAGCAGTGAAGGTGCTGTGATAAATGGACAGAGTTTTGGTGCTTGTGAATTTGAAAATCTTCAATGTTTGGCTAGTCATGGCTTGACATCAGAAGAGCTACCCGGGTGTGGACTACAGAATGCTGTCTCGAACGATATTTCTTCAGGAGCAATGAAGAAGAAAGGTAAAAACTGA 744 46.37 MEIPSSCSMDGFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLVKRLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLANPSIPGAYLMNPCNVRCENDQIYCLHPGVDGSRSSEGAVINGQSFGACEFENLQCLASHGLTSEELPGCGLQNAVSNDISSGAMKKKGKN 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7158581 7159324 + Carg19352-RA Car19g00567 167534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00567 247 Pfam Basic region leucine zipper 68 124 IPR004827 GO:0003700|GO:0006355
Car19g00567 247 MobiDBLite consensus disorder prediction 53 80 - -
Car19g00567 247 Coils Coil 80 114 - -
Car19g00567 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 69 116 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00620 Car-Chr16:3968604 Car19g00567 Car-Chr19:7158581 2.66E-140 wgd
Car19g00567 Car-Chr19:7158581 Car20g00651 Car-Chr20:3670644 5.69E-117 wgd
Car19g00567 Car-Chr19:7158581 Car07g00657 Car-Chr7:3338708 4.15E-127 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5284 PF07716 bZIP_2 6.60E-14 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00567 K25785 - csv:101208161 444.506