Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00585 ATGTTATCGGAGTTCATGGATTTCTTGAGGGCTTGTTTCCGACCGAGCTCCGATCGGTACGTGGCGGGGGATATCAAGGGGAGGCAGGACGGGCTGCTATGGTACAAAGATAGTGGACAACATTTGAATGGTGAGTTTTCAATGTCTGTGGTTCAAGCCAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCAGGCAGTTTGAGCACACACGAGTCTGGCCCCAGAGGAACGTTTGTTGGTGTGTATGATGGCCATGGAGGCCCCGAGACTTCTCGGTATATCTGTGATCATCTCTTCCAGCATCTCAAGAGGTTTACTTCTGAGCAAGATTCAATGTCTGCGGATGTAATACGCAAGGCATTCCAAGCGACAGAAGATGGTTTTCTTTCAATAGTTCAAAGGCAATGGTCAACAAATCCTCAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCACGTGCTGTTTTGGGTAGAGTAGTGAAGGCGACTGGCGAGGTTCTCGCCGTTCAGTTATCGACAGAGCACAATGTTTCTAATGAGTCGGTGAGGCAAGAGCTGCAATCTTTACACCCTGAAGACTCAAAGATTGTGGTTCTAAAGCATAATGTTTGGCGAGTGAAGGGCATAATACAGATCTCCAGATCCATAGGCGATGTGTACTTGAAAAAAGCCGAGTTCAATAAAGAACCTCTGTATTTAAAGTTTCGAGTTCGGGAGCCCTTCATAAAGCCAATTTTGAGCTCTGAACCAGCCATTTCTGAGACCCAGTTGAAGCCAGATGATCAATTTATTATATTTGCATCAGATGGGTTGTGGGAGCACCTTAGCAACCAGGAAGCAGTCGATATAGTTCATAGCCATTCTCAAAGTGGAAGTGCAAGAAGACTGGTCAGAGCTGCTCTCCAACTAGCTGCAAAGAAGAGAGAAATGAGGTACTCAGACTTGAAGAAGATTGACCGTGGTGTTCGTCGCCATTTCCACGACGACATCACCGTGGTGGTTGTGTTTCTCGACACAAATCTGCTCTTCAAAGCCAGTAACACAAAGAGCTCGAGTGTCTCACTACGAGGGGGTGGAGTCAACCGCAACTCTCTAGCCAAAACACCCCAAGTAGAACATGAAAATCCCTGA 1179 46.23 MLSEFMDFLRACFRPSSDRYVAGDIKGRQDGLLWYKDSGQHLNGEFSMSVVQANNLLEDQSQIESGSLSTHESGPRGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDSMSADVIRKAFQATEDGFLSIVQRQWSTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRVVKATGEVLAVQLSTEHNVSNESVRQELQSLHPEDSKIVVLKHNVWRVKGIIQISRSIGDVYLKKAEFNKEPLYLKFRVREPFIKPILSSEPAISETQLKPDDQFIIFASDGLWEHLSNQEAVDIVHSHSQSGSARRLVRAALQLAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDTNLLFKASNTKSSSVSLRGGGVNRNSLAKTPQVEHENP 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7264932 7268329 + Carg25760-RA Car19g00585 167552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00585 392 MobiDBLite consensus disorder prediction 366 392 - -
Car19g00585 392 Pfam Protein phosphatase 2C 69 320 IPR001932 -
Car19g00585 392 ProSiteProfiles PPM-type phosphatase domain profile. 45 353 IPR001932 -
Car19g00585 392 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00585 Car20g00642 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00633 Car-Chr16:4034763 Car19g00585 Car-Chr19:7264932 0 wgd
Car19g00585 Car-Chr19:7264932 Car20g00642 Car-Chr20:3616045 0 wgd
Car19g00585 Car-Chr19:7264932 Car07g00667 Car-Chr7:3388579 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00585 - K01102 csv:101211601 672.544