Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00587 ATGGATATTCCGAATCCCAGATTACATCTTCTCGCTGCTGTCCACATCTCTTCTCGCACTCGGTTCCTCTATCAGATCAGGAGAAGCGAAAAGCACAGTGATTCAAGTATGGGTATGGAACAAAACAATCATGATGCAGAGGAGGGAACGCTGGAGATTGGCATGGAATATCGAACAGTCTCGGGAGTTGCTGGTCCTTTGGTTATTCTGGACAAAGTCAAGGGACCTAAGTTTCAGGAGATTGTTAATATTCGTCTCGGAGATGGATCAACCAGGCGTGGTCAAGTCCTGGAAGTTGATGGGGAGAAAGCTGTTGTTCAGGTATTTGAAGGGACATCTGGAATTGATAACAAATATACAACTGTGCAATTTACTGGAGAGGTTTTGAAAACTCCAGTCTCTTTGGACATGCTCGGTCGAATTTTTAATGGTTCTGGAAAACCCATTGATAATGGTCCTCCTATCTTGCCTGAGGCTTATTTGGACATTTCTGGGAGTTCTATAAACCCTAGTGAGAGAACTTATCCTGAAGAGATGATACAGACTGGGATTTCTACAATTGATGTCATGAATTCCATTGCTAGAGGACAAAAGATCCCTCTTTTCTCAGCTGCAGGTCTTCCTCACAATGAAATTGCTGCCCAGATATGCCGTCAGGCTGGCTTGGTAAAGCGGTTGGAGAAATCCAACGATCTTCTCGAGGGTGGTGAAGAGGACAACTTTGCCATTGTTTTTGCCGCTATGGGTGTTAACATGGAGACAGCTCAATTTTTCAAACGTGATTTTGAGGAAAATGGTTCTATGGAGAGAGTGACCCTATTTCTAAACCTGATTGATGAAACTTTGTTGCGACTATTTATTCTTAAATATGGAGGCCATGGTATTTTACAGGCTAATGACCCTACAATCGAGCGTATTATCACTCCTCGTATTGCTCTTACCACCGCTGAATATTTGGCTTATGAATGCGGGAAGCATGTTCTCGTCATATTGACAGACATGAGTTCTTATGCTGATGCCCTTCGAGAGGTGTCTGCAGCACGAGAGGAAGTACCCGGAAGGCGTGGATACCCTGGTTATATGTATACTGATCTTGCTACAATCTATGAGCGAGCTGGACGTATTGAAGGACGTAAAGGATCCATCACTCAAATCCCAATCCTCACTATGCCAAACGATGATATTACACATCCGACTCCCGATCTTACTGGATATATTACCGAGGGACAGATCTACATCGATAGGCAGCTCTACAACAGACAGATATACCCACCAATCAATGTCCTTCCTTCATTGTCTCGTCTGATGAAGAGTGCCATTGGTGAGGGAATGACCCGTAGGGATCATGCTGATGTATCCAACCAGCTCTATGCAAATTATGCAATTGGGAAGGATGTTCAGGCAATGAAAGCCGTGGTTGGAGAAGAAGCACTCTCTTCTGAGGATCTGCTCTATTTGGAGTTTTTGGACAAATTTGAGAGGAAGTTTGTCTCTCAAGGAGCTTACGATACTCGAAATATTTTCCAATCGCTTGATCTGGCATGGACACTGCTTCGTATTTTCCCTCGCGAACTTCTGCACCGTATACCTGCAAAGACTCTTGATCTGTTTTACAGCCGAGAATCTGCAAATTAA 1635 43.85 MDIPNPRLHLLAAVHISSRTRFLYQIRRSEKHSDSSMGMEQNNHDAEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSNDLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLIDETLLRLFILKYGGHGILQANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVSQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDLFYSRESAN 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7271788 7276588 + Carg25758-RA Car19g00587 167554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00587 544 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 183 433 IPR000194 GO:0005524
Car19g00587 544 ProSitePatterns ATP synthase alpha and beta subunits signature. 424 433 IPR020003 GO:0005524
Car19g00587 544 Hamap V-type ATP synthase beta chain [atpB]. 54 542 IPR022879 -
Car19g00587 544 Pfam ATP synthase alpha/beta family, beta-barrel domain 60 126 IPR004100 GO:0046034|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02027 Car-Chr4:16299419 Car19g00587 Car-Chr19:7271788 5.11E-30 dispersed
Car15g00881 Car-Chr15:5239754 Car19g00587 Car-Chr19:7271788 6.13E-29 dispersed
Car18g00906 Car-Chr18:9874969 Car19g00587 Car-Chr19:7271788 7.72E-28 dispersed
Car16g00635 Car-Chr16:4040437 Car19g00587 Car-Chr19:7271788 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00587 K02147 - csv:101211838 949.888