Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00610 ATGCAATTCAATGCCTTCAAATCCAAAATCCTTCCGCCATTGTTATACTTTCGCTCTGCCTTGGACCTCGCTATTCCATTTCAACTCGGAATCGTCGAATCTACTTTCGATTCCAAGCGCCGCCATAATCCACGCAAGAAGCGGTCAAGAACTGAAAATGCCTCCACTGCTGCCGTCGGTTCCAAGGCTAAGTATAGAAAGAAGCCGGATCCTACTGCGCCGAAGATCACTCCTCCGTGTAGTGAGTGTGGGAGGAGGTTTTGGTCGGATAAAGCGCTTTTTGGTCATATGAGGTGTCATCCTGAACGACAATGGCGGGGGATTAATCCGCCGGTTAGTTTCCGTCGCTCGGTTTCGGTTTCTCCTTTTAGACCTAGAGCTGATTTGGAAGAATCGGCGTTTACGGAAGAGGAACAGGACGTCGCTAATTGCTTGTTAGTGCTTGCCGATTGCCCTAGTGCGATCGCTAGGGTTTCCGATTTTCGATTCGAATGCGCGAGTTGTAAGAAAGTGTTTGGATCGCACCAGGCGCTTGGAGGACATAGGGCAAGTCACAAGAATGTGAGAGGCTGTTCCGCCATGGCGAAGAGCGATGAAGAAATAGAACATGATGCTCTGTTTGGACATTGTGGTCATGATTTGAGCATCAATCTGGAGGATAAAATGTCGATGATTTTAGGAACAGCAGCAGGGCATAAGTGTAGTGTATGTATGAGGGTTTTCGCGAGTGGTCAAGCACTTGGTGGCCATATGAGATGCCATTGGGAGAGAGTGGAGGAGAATGCAGCTACAGAAGAGGGGTTTCTTAACTTGGACTTGAACATGCCTGCCCCTGTTGAAGATGCCTCTTCTTCTTCGTATTCTTCAGGTCTCACTCTTGATCTTAGGTTGGGCCTTTGA 900 48.33 MQFNAFKSKILPPLLYFRSALDLAIPFQLGIVESTFDSKRRHNPRKKRSRTENASTAAVGSKAKYRKKPDPTAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINPPVSFRRSVSVSPFRPRADLEESAFTEEEQDVANCLLVLADCPSAIARVSDFRFECASCKKVFGSHQALGGHRASHKNVRGCSAMAKSDEEIEHDALFGHCGHDLSINLEDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNMPAPVEDASSSSYSSGLTLDLRLGL 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7584838 7586307 + Carg04091-RA Car19g00610 167577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00610 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 232 254 IPR013087 -
Car19g00610 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 163 190 IPR013087 -
Car19g00610 299 MobiDBLite consensus disorder prediction 38 76 - -
Car19g00610 299 ProSitePatterns Zinc finger C2H2 type domain signature. 234 254 IPR013087 -
Car19g00610 299 Pfam C2H2-type zinc finger 80 102 - -
Car19g00610 299 Pfam C2H2-type zinc finger 232 256 - -
Car19g00610 299 Pfam C2H2-type zinc finger 162 186 - -
Car19g00610 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Car19g00610 299 ProSitePatterns Zinc finger C2H2 type domain signature. 165 185 IPR013087 -
Car19g00610 299 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00610 Car20g00616 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00581 Car-Chr3:5520871 Car19g00610 Car-Chr19:7584838 1.70E-10 dispersed
Car11g00174 Car-Chr11:1006907 Car19g00610 Car-Chr19:7584838 4.87E-17 dispersed
Car13g00922 Car-Chr13:9504396 Car19g00610 Car-Chr19:7584838 2.24E-19 dispersed
Car19g00610 Car-Chr19:7584838 Car02g01154 Car-Chr2:7920188 1.69E-22 dispersed
Car19g00610 Car-Chr19:7584838 Car20g00616 Car-Chr20:3450662 1.39E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00610 - - cmos:111455526 560.066