Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00619 ATGGAAGAGAAAAGAGGTCACCATTGCTTCAGTGGAGCTGACAAATCCTGTTGGGACCTTCGGGATTGGATATGGCAGAATGAAGAGATTTCCTACTTGGGAATTTCCGAAGGGGCCTCAAGAACTGAAGTAGTGAAAGTTGGAGCTATATTTTCACTTCGTTCTGTTAATGGAAAAGTGTCAAAGATTGCCATTGAGGCTGCTGAGAAAGATGTGAATTCTGATCCAAGTGTTCTTGGTGGAAGAAAGCTATCTATATCCATACATGATGCAAATTACAGTGGATTTCTTGGTATCACAGGAGCAATAAAGTACATGGTATCTGACACGGTTGCTATCCTTGGTCCACAAGATGCTACTATGGGACATATACTCTCACATCTTTCAAATGAACTCCATGTCCCATTACTATCATTTACAGCATTGGATCCAACACTTTCAACTTTGCAATATCCATACTTCATTCAAACAGCTCCAAATGATCAATTCCAGATGGCAGCAATAGCAGATATGATTAGTTATTACAGTTGGCACGACGTCGTCGTGCTTTACACCGACGATGATCAATGTCGAAACAGCATGTTCGCATTAGGCGACAAAATCGAAGAAAAAGGCTTGAAAATACCCTCTAAAGTAGCACTTCCCCCTTACCCAACAGCCACAAGAACTCAAGTTCACGACGCGCTCGTAAAGATTAAAATGATGGAATCTCGAGTTATCGTATTATATACGTTCTCGAAAACAGGTTTCTTGGTTTTCGAAATGGCTAAAAGCCTTGGAATGATGGAGGCTGGATATGTTTGGATAACCTCTAGTTGGCTATCAACAGTTATAGATTCTACTTCACCCCTTCCCTTGAAAACGGCTAACTCCATACAAGGCGTTCTTACGCTTCGGCTACATACACCCGAGTCGAAAAGGAAGCGATCGTTTATATCTCGTTGGAACGAGCTGAGTAATGGCTCGATTGGGTTGAATACTTATGGCCTATATGCATATGATACTGTTTGGATGATTGCAAGAGGAATTAAAGAGTTATTTGATCAAAATGGTACCATTTCTTTCTCCAAATATACACATGCTGGTAGTCTTAGTGGAGAGAGCTTGGATTTTAGTTCACTAGGAGTGTTTAATGAGGGAAATGAGCTGCTTAACAATCTATTGAATATCAGTATGATTGGCCTGACAGGGCCTATTCAGTTTCAAGATAGATACCCTTTGCATCCCTCATATGATATCTTGAATGTTGTGAAATCTGGTATGAAGAGTATTGGATATTGGTCGAACCATTCGGGGCTATCTGTCGTGGCGCCCGAAACGCTGTATGGAAAAGCAGGCAATCGTACCGATCAGTTAGGCAGCATGGTGTGGCCTGGGGGATTGACAACAAAGCCTCGTGGTTGGGTTCTTCCACTCGATGGAAGACGGTTAAGAATTGGCGTTCCACGCCGAGTTAGTTATCAGGAGTTTGTGACGCCCGGAAGTGGTAACGAAACGATTAAAGGATACTGCATTGACGTGTTCGTTGCGGCGGTCGAGTTGCTTCCATATGCTGTTAATTATGAGTTTGTTTTGTTTGGAGATGGCAAGGAGAATCCTAGCTACTTTGAGCTTGTTAATAATGTTGCATTGAAAGAATTTGATGCTGCTGTTGGTGATATTGCAATTGTGACGAGTCGTACCAAGATTGTCGATTTTACGCAACCTTATATCGAGTCGGGGCTAATAGTGTTAGCCCCTGTGAAGAATTTGAACTCGAGTCCTTTGGCGTTCCTTCGACCGTTCACACCAATGTTGTGGATTGTCTCGGCAGCCTTTTTCCTTCTCATTGGATTAGTCGTGTGGATTTTGGAACGTCGAGATAACGACGAATTCCAAGGACATCCTAGGAAGCAATTCGTCACGATCCTCTGGTTTGGCTTCTCTACTATGTTCTTTGCACAAAGAGAAAACGTCATGAGCACGCCCGGTCGTTTCGTGCTTGTCATATGGCTTTTTGTGGTTCTAATTATAAACTCGAGCTACACCGCTAGTCTAACGTCGATATTCACGGTACAGCTAGCAACCTCACCTATCACAGGAATTGATTCATTGATATCTACCAATGTCCGTATAGGATTCCAAGTTGGTTCGTTTGCTGAAAGTTATTTAAATGAGGAACTTAACGTCCATAAGTCAAGGCTCATTGCTCTTGGATCCCCAAAAGAGTATGCTGCTGCTCTCAAGAACGGCACGGTGGGCGCTATCGTTGACGAGCAGCCATACATCGATGTTTTTCTCGCCGAGTACTGCGATTATTTGACAAAAGGCCAACAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCGCGAGACTCTCCATTGGCGGGAGACTTGTCGACGGCCATACTCACTCTATCTGAGAATGGCGGTCTTCAAAAGATTCACGATCAGTGGTTCTCAAGAAAGTCTTGCAGTTCTGGAGATTCCAATCTCGATCAAGAACAACTTCACTTGCAGAGTTTCATTGGACTCTTCTCCATTTGTGCCGGCGTATGTTTCTTCGCACTTTTCCTGCATTTCTTCTTGACGATGTGCCAATACAACCGCCATTTGAAGCAAGATCCAGAAGCTTCGAGCAATCGCGTTTCCAACCCTACGCGTCTGCGCAAATTCTTATCGTTTGCAGACGCAAAGAGAGGAGGCTTATCGAAGAGAAAGATCGAAGATACATGCTCGAGTGAACGTGGAGAGAATTAG 2739 43.52 MEEKRGHHCFSGADKSCWDLRDWIWQNEEISYLGISEGASRTEVVKVGAIFSLRSVNGKVSKIAIEAAEKDVNSDPSVLGGRKLSISIHDANYSGFLGITGAIKYMVSDTVAILGPQDATMGHILSHLSNELHVPLLSFTALDPTLSTLQYPYFIQTAPNDQFQMAAIADMISYYSWHDVVVLYTDDDQCRNSMFALGDKIEEKGLKIPSKVALPPYPTATRTQVHDALVKIKMMESRVIVLYTFSKTGFLVFEMAKSLGMMEAGYVWITSSWLSTVIDSTSPLPLKTANSIQGVLTLRLHTPESKRKRSFISRWNELSNGSIGLNTYGLYAYDTVWMIARGIKELFDQNGTISFSKYTHAGSLSGESLDFSSLGVFNEGNELLNNLLNISMIGLTGPIQFQDRYPLHPSYDILNVVKSGMKSIGYWSNHSGLSVVAPETLYGKAGNRTDQLGSMVWPGGLTTKPRGWVLPLDGRRLRIGVPRRVSYQEFVTPGSGNETIKGYCIDVFVAAVELLPYAVNYEFVLFGDGKENPSYFELVNNVALKEFDAAVGDIAIVTSRTKIVDFTQPYIESGLIVLAPVKNLNSSPLAFLRPFTPMLWIVSAAFFLLIGLVVWILERRDNDEFQGHPRKQFVTILWFGFSTMFFAQRENVMSTPGRFVLVIWLFVVLIINSSYTASLTSIFTVQLATSPITGIDSLISTNVRIGFQVGSFAESYLNEELNVHKSRLIALGSPKEYAAALKNGTVGAIVDEQPYIDVFLAEYCDYLTKGQQFTKSGWGFAFPRDSPLAGDLSTAILTLSENGGLQKIHDQWFSRKSCSSGDSNLDQEQLHLQSFIGLFSICAGVCFFALFLHFFLTMCQYNRHLKQDPEASSNRVSNPTRLRKFLSFADAKRGGLSKRKIEDTCSSERGEN 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7642635 7651241 + Carg04100-RA Car19g00619 167586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00619 912 MobiDBLite consensus disorder prediction 893 912 - -
Car19g00619 912 Pfam Bacterial extracellular solute-binding proteins, family 3 491 814 IPR001638 -
Car19g00619 912 Pfam Ligand-gated ion channel 815 845 IPR001320 GO:0015276|GO:0016020
Car19g00619 912 Pfam Receptor family ligand binding region 63 418 IPR001828 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01418 Car19g00619 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00619 Car-Chr19:7642635 Car20g00529 Car-Chr20:2910769 0 dispersed
Car01g01595 Car-Chr1:13172205 Car19g00619 Car-Chr19:7642635 0 wgd
Car11g01418 Car-Chr11:11594571 Car19g00619 Car-Chr19:7642635 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00619 K05387 - csv:101208602 1402.5