Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00632 ATGGCTGCCTTTGTAGCTATAGTAGTCTACTTGGTTCTTCTGCAAACACCCAATCTCTTTGCGGCTATGGATGAAGAGTGGAAATCTGCTACTGCAACATACTCCAAAGAAACAGATGGGTCCATTGTTACAGAAGGTGCGTGTGGATATGGAGATCTGCATAAAATTAGCTATGGAAAATATAGCGCAGGATTGAGTAGCATGTTGTTTAATAGAGGGAGTACCTGTGGAGCTTGCTATGAGCTTAGATGTGTTGACCACATCTTGTGGTGCTTGCAAGGAAGCCCGACCGTTGTTCTAACAGCCACCGACTTCTGTCCTCCAAATTACGGCCTATCTTCTGATTATGGTGGTTGGTGTAATTTTCCTAAAGAACATTTTGAGATGTCAGAGGCAGCATTTGCTGAAATATCAGAGAAAAAAGCAGATATTGTACCAGTTCAATATAGGAGGACGAGGTGTGATCGAAGCGGTGGATTGAGGTTCACGGTTAGTGGAAATTCTCGTTTCTTTCAAGTTCTGATTACCAATGTTGGAATGGATGGTGAATTAGTGGCAGTGAAGGTAAAAGGATCAAGAACAGGATGGATACCATTGGCAAGGAACTGGGGACAAAACTGGCAAAGCAATGTCAATCTTCATGGGCAACCTCTCTCGTTCGAAGTTACCTCTAGCATTGGAAGAACACTTACTTCCTACAGCGTTGCACCTGCAAACTGGCAGTTTGGGCAGACATTTGAAGGAAAACAATTTTGA 756 43.25 MAAFVAIVVYLVLLQTPNLFAAMDEEWKSATATYSKETDGSIVTEGACGYGDLHKISYGKYSAGLSSMLFNRGSTCGACYELRCVDHILWCLQGSPTVVLTATDFCPPNYGLSSDYGGWCNFPKEHFEMSEAAFAEISEKKADIVPVQYRRTRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSIGRTLTSYSVAPANWQFGQTFEGKQF 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7703571 7704842 + Carg04113-RA Car19g00632 167599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00632 251 Pfam Lytic transglycolase 63 149 IPR009009 -
Car19g00632 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Car19g00632 251 Pfam Expansin C-terminal domain 161 237 IPR007117 -
Car19g00632 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 159 IPR007112 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01427 Car19g00632 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00632 Car-Chr19:7703571 Car04g00193 Car-Chr4:1056885 6.80E-92 dispersed
Car11g01427 Car-Chr11:11641504 Car19g00632 Car-Chr19:7703571 5.82E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00632 - - csv:101213241 492.271