Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00644 ATGGGGTCTGGAATCCGCCAATGCCATATCATACTCCTACGGTCGTCCTCCTTCACTTTCATGCGGTCTTCTCTGGAGCAGATATTTCTGTTCATCGATGAAAAAGTTGAACCGGACAAATTCCTTATGAGGGCTCATTGGAAGAATTCCCAGATTAGTTCTGTTCTAAGTCTGTTGAATTCTGTGATTATTTGTTGTATCTTCCGTACACGTGCAAGAGAGAAAGATCAGAAAATAGATGAGAAGAGTGAAACCAAAGAGCCATCAAGGTCTAATCTGTCATATCCTTCTCATCAAATCAGCCCTACAGAGAAGAGGACACCAATTGAAGTCTTTCAAGTGCCTGAAAGTTTAGGAGATGACCATTCCAAAGGAGAGAGTGATGCCACTCATGATCAGGTTGGGGCAAAATCAACCGACACTTCCTTTTGTCCTGCTGCCAGCATGAAAGCATCTAAAAAGTGGATGGCATTTGAAAGTGAAAACTTAGATACAACAAAGACATACACAAAGAGCTTCAGTGGTAGCTTTGGGTCGTCTTTTACTGAACTCTTGGAAACAACCATGACAAAAAAGACTGCAGAGAAGAATAAGATCGGCGATTTATCGTCGTTGACGTATGTTATCTCAGATGCAACAAAACCGGATTGCCCCATCGTGTTTGCCAGTGATAGGTTCTTGGTTATGACTGGATATACATTGGAGGAGCTCATTGGAAGGAACTGCCGTTTTCTTCAAGGACCGGAGACGGATAAGAACGAAGTAGCAAAAATACGAGATGCAATCGGAAAGGGGAATAGCTACTGTGGCAAGCTCTTGAACTACAAGAAGAATGGTACTCCTTTCTGGAATCTTCTCACTGTTGGGCCTGTCAAGGATTCCCATGGCAACATCATCAAGTTTATCGGAATGCAGGTTGAAATTGGCAAAAACACAGAAGAAAAAGAAAAGTCCATGAGGTCGTCCATGTCCATGACAGAGGTCCAAGCTGAGAAGGTAATTAAGTCCATTGAGGTCGAGGCTGCGAAAAGCCTAAGATCTTCCGTTCAGTCAAAAAGACACGATGCAGATAGAAAGCCCGAAGAGTCAGAAACGACTGGCGAGAATACTAGCACAGCTGATAACCAAAAGGCTCGGTTCAAAGAAAGGACTCTAGGCTCTGCAGTCGAACGTGAAGAACAGACCGTTGTTGAGACATCTGTTTTCAAGCTTGGGGACGGTGATCGTATCGCTACAAGAGAAAGGGACATACGTCAAGGAATTCAGTTGGCTACCACATTGGAACGAATTGAGAAGAAATTTTTTATCACGAACCCAAGACTTCCTGATAATCCTATTATATTTGCATCTCGAAGGTTTCTTCATTCCACAGAATACACGTGCGAAGAAGTTCTTGGGAGAAACTTTTGGTTTCTTCAGGGACTTGAAACAGATCAAGCAACTGTCTCAAAGATAAACGATGCAATTGAAGAACAAAGAGAAATCACTCTTCAGATAATCAACTATACAAAGAGTGGAAAAAAGTTCTTGAATTTGTTCCACTTGCAACCCGTGTATGATCAAAAGAAGGGCGAGCTTCAATATTTCATTGGCGTGCTACTTCATCTAAAACGTTCGAAAGACCGGCTTTTAGATCGGATGAAGCATGAACGAACTAAGCTGGTCAAAGATATAGCAGAAAGTGTCGACAGGGCTGTCCGAGAACTTCCCGACGCCAACTTGAAACCAAGGAATTTCTGGGAAATTTACTGTCAGCCAGTCTTACCAAGGCCTCACAAGAAGTATAGTCCTTCCTGGATAGCCATACAAAAGATTACCAGTCATGGTGAAAAGATAGGACTCCATCATTTTAAGCCAATAAAACCTCTGGGTTTTGGAGACATTGGAAGTGTTCATTTGGTAGAACTGAATGGAACAGGTGAACTCTTTGCAATGAAGGTTATAGAGAAGTCAGTAATATTAAATCGTAACAAGGTTCACCGAGCATGCATGGAAAGGGAAATCATATCACTTTTGGATCATCCTTTCATGCCAACACTATACTCTTCATTTCAGACACGTACGCACATTTTTCTGATAATGGACTTCTGCCCGGGCGGAGAGTTATTTACGTTTCTTGACAATCAGCCAATGAAAATGTTTAAAGAGGAAGCTGCTGGGTTCTATGCTGCAGAAGTTGTCATTGCTTTAGAGTACCTTCACTGTTTAGGTATTGTCTACAGGGACCTAAAACCCGAAAACATTCTACTCCAAAAAGATGGACATATCGTCCTCACTGATTTCGATTTATCATTTAAGACGTCAAATATACAAACCACAAAATCTCCACCCCGGAAACGGATTAAGGGATCTTGGCATAGATTGGTGCCGACGTTCGTTGCTGAACCGATTGTACAACTGAATTCATTTGTAGGAACTGAAGAGTACATTGCTCCCGAGATCATTATGGGAGCAGGCCATAATAGTTCTATTGACTGGTGGACTCTTGGTATTTTGCTGTATGAAATGCTCTATGGTCGCACACCCTTCAAAGGCAAGAACAGGAAGAAAACCTTTTCCAATATTTTGTTCAAGGACTTGACCTTTCCCCTTAGTATTAAGGTGAGTCTTGCAGGAAAGCAGCTGATTGATGCACTACTACAGAGAGACCCTGCACGTCGTCTAGGATCAAGTACCGGTTCCGATGAAATCAAACGACATCCATTTTTCCGTCATATAAACTGGCCTAAGATACGAACAATGACTCCACCATCAACAGAAGTAGCCCTTCAGTTATTTGAGAGAGATCCAAAGGCTAATGATTTGAAGTGGGAAGATGGAGTGCTCAGTCACTCAATAGGCTCTGATGTATTCTGA 2856 42.23 MGSGIRQCHIILLRSSSFTFMRSSLEQIFLFIDEKVEPDKFLMRAHWKNSQISSVLSLLNSVIICCIFRTRAREKDQKIDEKSETKEPSRSNLSYPSHQISPTEKRTPIEVFQVPESLGDDHSKGESDATHDQVGAKSTDTSFCPAASMKASKKWMAFESENLDTTKTYTKSFSGSFGSSFTELLETTMTKKTAEKNKIGDLSSLTYVISDATKPDCPIVFASDRFLVMTGYTLEELIGRNCRFLQGPETDKNEVAKIRDAIGKGNSYCGKLLNYKKNGTPFWNLLTVGPVKDSHGNIIKFIGMQVEIGKNTEEKEKSMRSSMSMTEVQAEKVIKSIEVEAAKSLRSSVQSKRHDADRKPEESETTGENTSTADNQKARFKERTLGSAVEREEQTVVETSVFKLGDGDRIATRERDIRQGIQLATTLERIEKKFFITNPRLPDNPIIFASRRFLHSTEYTCEEVLGRNFWFLQGLETDQATVSKINDAIEEQREITLQIINYTKSGKKFLNLFHLQPVYDQKKGELQYFIGVLLHLKRSKDRLLDRMKHERTKLVKDIAESVDRAVRELPDANLKPRNFWEIYCQPVLPRPHKKYSPSWIAIQKITSHGEKIGLHHFKPIKPLGFGDIGSVHLVELNGTGELFAMKVIEKSVILNRNKVHRACMEREIISLLDHPFMPTLYSSFQTRTHIFLIMDFCPGGELFTFLDNQPMKMFKEEAAGFYAAEVVIALEYLHCLGIVYRDLKPENILLQKDGHIVLTDFDLSFKTSNIQTTKSPPRKRIKGSWHRLVPTFVAEPIVQLNSFVGTEEYIAPEIIMGAGHNSSIDWWTLGILLYEMLYGRTPFKGKNRKKTFSNILFKDLTFPLSIKVSLAGKQLIDALLQRDPARRLGSSTGSDEIKRHPFFRHINWPKIRTMTPPSTEVALQLFERDPKANDLKWEDGVLSHSIGSDVF 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7764953 7776692 - Carg04125-RA Car19g00644 167611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00644 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Car19g00644 951 ProSiteProfiles PAS repeat profile. 219 265 IPR000014 -
Car19g00644 951 MobiDBLite consensus disorder prediction 89 106 - -
Car19g00644 951 MobiDBLite consensus disorder prediction 345 385 - -
Car19g00644 951 ProSiteProfiles Protein kinase domain profile. 617 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00644 951 MobiDBLite consensus disorder prediction 347 365 - -
Car19g00644 951 MobiDBLite consensus disorder prediction 76 139 - -
Car19g00644 951 Pfam PAS domain 213 308 IPR000014 -
Car19g00644 951 Pfam PAS domain 442 533 IPR000014 -
Car19g00644 951 MobiDBLite consensus disorder prediction 117 133 - -
Car19g00644 951 ProSiteProfiles PAC domain profile. 266 320 IPR000700 -
Car19g00644 951 Pfam Protein kinase domain 619 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00191 Car19g00644 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00618 Car-Chr2:4649249 Car19g00644 Car-Chr19:7764953 2.03E-17 dispersed
Car19g00644 Car-Chr19:7764953 Car11g01352 Car-Chr11:11072588 5.68E-104 dispersed
Car20g00392 Car-Chr20:2179721 Car19g00644 Car-Chr19:7764953 1.37E-07 dispersed
Car04g01670 Car-Chr4:9606281 Car19g00644 Car-Chr19:7764953 3.25E-24 transposed
Car19g00644 Car-Chr19:7764953 Car02g00191 Car-Chr2:1138326 3.84E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89571 PF00069 Pkinase 2.50E-61 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00644 K20715 - csv:101213364 1359.36