Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00676 ATGCTTCTTTCTCCGGGTCGTTCTCCCCGGCATATCTCATCCCCTTCGCCGTCGACGGTTTCCGAGAATTCGATTCAGAATCCGCGGAGTTCGTCTTCGATTACGCCTCAGAGCTCTAGGAAACATCCCGAGGTTCTTGACGAGGATACTTATGTGGAAGCGATTGAGAAGATTATTGAGCGTGATTACTTTCCTGACATTTCGAAACTCAGAGATCGTATGGATTGGCTTGAAGCGGTTAAAAGTGGAGATCCGATTCTAATTCGAGATGCGCAGTTGAAGATCATGGAGCGTCGTGGCCAGAAGGTCAAACGTTTGAATCCTGATGGTAAGTCCCGAACACCTGGTTCCACTTTCATGAGAAATTTTACCCCGTTTGATGAATTTGAGGGCAAAACACCGAAAACCCCCGGCGTTAGTGGAAGTGGAATTTCCGGTGAAACGGAGGAGGGTGATTGTAACGGCAAGGTGATGGATGAATCGCTGTCGCTTGATGAGTTTTTTAGGCAATATACGAGCGAGGATAATTTAAGTTTTTCAAAAATTCTGGACAAAGATAATAGGAAGAGGAAGGAGAGATACGCGTATTTGACGGAGGGTGAGAAGGAGGATGTGAAATCATTTGAGGATGTAAAGAGAGATAGAATAACTGATGGTTATGGGACCTCCGATCAGCCGCCGAGTACCTTGGAAGGATGGAACTACACTGCAAAAAATTTGTTGATGTATCATCCTTCCGATAGAGGTGAGGCTCCACTGACAGATGAAGAAAGGGCTGTTAGATTGAAGGGCTTAACCAAAGAAATTAGCCGAGCAAGCACTCGGTTCCATGGTAAATTGATCGATGCGAGACCAAAAGACGATGGTACAGTTGAAGTGCTCTATACCCCTGTGGCTGGAACTACCCCACATCCTGTGATGGATCGAGATGGGGATCGATTGAAGAAGTACGATTTGGGGGATTTGAGGAAAACCCCAAATCCATTTTATATAGAATCGGGGAAGAAGGCTGAGAATGGCTACAGTTTTGTCCGTACACCGTCCCCTGCCCCTGGTGTTGATGAATCTCCATTTATTACATGGGGTGAAATTGAAGGTACACCCTTAAGACTAGATCCTGAGGAGACGCCTATCGACATCGGTGGTACTGTTGATGGGCCACGATTTAATATTCCATGTCCACCTGCTCGAGATCAGAAGGCTCATTCACTCTCAAGGGAGGCTGCACGAAAGCTAAGGGAGAAATCAAAGATGTTTCAGAAGCCACCATTGCCATCACCTGTTAGAGGAGGAAGTGCTAGCCCAAGTGTTCGAAGGACGCTCTCTCCAGCCGCCCAGAAGTTTGTAAGGAATGCAATAGCCAAGTCGTCATCTTCATTTGATGAAACTCTCCGTGCCAGTTACCGAGGTGGAAGCCCGAGTTCTGCAACGCCTAAAAGTGGGAGGAGTTTGTCTAGGTTTGCTAGAGATGGGAGCTTTGGCTCAAGGTCACCTTCTGTTAAAGAAGATTCTAATCCTGCTTGGTGA 1527 46.82 MLLSPGRSPRHISSPSPSTVSENSIQNPRSSSSITPQSSRKHPEVLDEDTYVEAIEKIIERDYFPDISKLRDRMDWLEAVKSGDPILIRDAQLKIMERRGQKVKRLNPDGKSRTPGSTFMRNFTPFDEFEGKTPKTPGVSGSGISGETEEGDCNGKVMDESLSLDEFFRQYTSEDNLSFSKILDKDNRKRKERYAYLTEGEKEDVKSFEDVKRDRITDGYGTSDQPPSTLEGWNYTAKNLLMYHPSDRGEAPLTDEERAVRLKGLTKEISRASTRFHGKLIDARPKDDGTVEVLYTPVAGTTPHPVMDRDGDRLKKYDLGDLRKTPNPFYIESGKKAENGYSFVRTPSPAPGVDESPFITWGEIEGTPLRLDPEETPIDIGGTVDGPRFNIPCPPARDQKAHSLSREAARKLREKSKMFQKPPLPSPVRGGSASPSVRRTLSPAAQKFVRNAIAKSSSSFDETLRASYRGGSPSSATPKSGRSLSRFARDGSFGSRSPSVKEDSNPAW 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7963994 7965520 + Carg04157-RA Car19g00676 167643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00676 508 MobiDBLite consensus disorder prediction 393 508 - -
Car19g00676 508 MobiDBLite consensus disorder prediction 1 47 - -
Car19g00676 508 Pfam Nuclear protein Es2 43 448 IPR019148 -
Car19g00676 508 MobiDBLite consensus disorder prediction 400 418 - -
Car19g00676 508 MobiDBLite consensus disorder prediction 9 40 - -
Car19g00676 508 MobiDBLite consensus disorder prediction 451 482 - -
Car19g00676 508 MobiDBLite consensus disorder prediction 105 153 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00676 Car20g00574 CCT
Car19g00676 Car20g00574 ECH
Car11g01464 Car19g00676 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01464 Car-Chr11:11838641 Car19g00676 Car-Chr19:7963994 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00676 K13118 - csv:101212240 924.85