Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00721 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCTAAAGAGTACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGACAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCCACCTTTCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGAGTGCGTGTTACAACTCTTGGTCCATGGTTTCTTTTTGTGCCTGCGTTGTCTTTTCTGTTCTTGTATCGAAGCGCAGCATCCGTTTGTTTTCTGCGATATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCGGGAGCCGGGGGAAAAGAGTATGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGTCTGACTACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATTCACGGTTTTTAA 753 43.96 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHECVLQLLVHGFFLCLRCLFCSCIEAQHPFVFCDIPSAFDPFADANAEDSGAGGKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8228536 8235148 - Carg19178-RA Car19g00721 167688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00721 250 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Car19g00721 250 ProSiteProfiles Translation initiation factor SUI1 family profile. 168 238 IPR001950 GO:0003743|GO:0006413
Car19g00721 250 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Car19g00721 250 Pfam Translation initiation factor SUI1 165 239 IPR001950 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01523 Car19g00721 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01523 Car-Chr11:12255877 Car19g00721 Car-Chr19:8228536 1.12E-72 dispersed
Car16g00540 Car-Chr16:3428428 Car19g00721 Car-Chr19:8228536 9.54E-56 dispersed
Car11g01522 Car-Chr11:12252466 Car19g00721 Car-Chr19:8228536 1.01E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00721 K03113 - csv:101219651 223.787