Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00757 ATGGTTTGTTTTGGCTTCAGTAGCGGAGGTCTATTGGCATATGCAGATTCACAATCAGAGGATAGCAGTCCTATTGAGGAGTGCCCAAAAAAGAGAGTTCTGGTGCTTGGAACAGGATGGGCCGGTACCAGTTTCCTCAAGGATCTGGATGCATCGAAATATGATGTTCAGGTTGTTTCGCCTCAGAATTATTTCTCATTTACTCCTTTATTGCCTAGCGTTACATGTGGAACAGTTGAAGCACGGAGCATTGTCGAACCTGTTCGAAACATCGTGAAGAAGAGAAAAGGTGAAGTTAAATTCTGGGAAGCTGAATGCACTAAGATTGATGCTGCAAACAAAAAGGTTTTCTGCCGGTCATTAGTTGACAATAACTTGGTTGGAAATAGGGAGTTTGCTTTAGAATATGACTATTTGGTAATAGCAATGGGAGCGCAAGTTAATACTTTTAATACTCCTGGTGTCAAGGAGAACTGCCATTTTCTCAAGGAAGTGCAAGATGCTCAGAAGATCCGCAAAAGTGTGATAGATTGCTTTGAAATGGCTGTGATTCCTAGTCTAAGTGACGAAGAGCGAAGGAGAAATCTTCATTTCGTTATTGTTGGAGGGGGTCCCACCGGGGTTGAATTTGCTGCCGAGCTTCACGACTTCTTTAAAGAAGATTTGGTTTATTTATATCCTACGGTTAAAGATTTGGTGAAAATTTCAGTGATTCAATCAGGAGATCACATCTTGAATGCGTTTGATGAAAGAATTAGTTCATTTGCCGAACAAAAATTCCAAAGAGATGGTATTGATGTGCACACAGGATGTCGAGTTATCAGTGTATCTGATAAGGAAATTAAGATGAAGGTGAAATCATCTGGAGAAGTCTGTTCAATACCGCATGGATTAATTGTGTGGTCTACAGGCATCATGACTCGTCCTGTTGTGAAGGATTTCATGGAGCAAATTGGCCAGGGTAGTAGACGCATTCTAACCACTGATGAATGGCTTCGAGTGAAGGGCACTCAAAATGTGTATGCCATTGGTGATTGTGCTACAATTGACCAACGCAAAATTATGAAAGATATTGCCGCCATATTTGAAGCTGCAGACAAAGATAACTCTGGAACCCTGACAGTTACAGAATTTCAAGATGTTATAGATGATATCCTCATTAGGTATCCTCAAGTAGAAATATATTTGAGGAGCAAACATCTACGTGATGTAAAAGATCTATTGAAAGATTCTCAGGGACATGAGGACGAAGTAGATATTGAAGGATTTAAGTCGGCTCTTTCTCATGCTGACACGCAGATGAAAAATCTACCAGCTACTGCACAGGTTGCTGCCCAACAAGGTGCGTATCTTAGCAGGTGCTTCAACCGTAGGGAGCAGTGCACTGAGAACCCTGAAGGCCCTCGACGTTTTAAGAGTTCTGGACGTTATCAGTTTCTTCCCTTTCGGTACAAGCACTTGGGACAGTTCGCCCCTTTAGGGGGAGAACAGGCCGCTGCAGAACTCCCTGGAGACTGGGTTTCCATGGGTCGCAGCACCCAGTGGCTCTGGTATTCTGTATATGCAAGCAAGCAGGTCAGCTGGCGCACGAGGTATTTAGTGGTATCAGACTGGACAAGGAAGTTTGTATTTGGAAGAGACTCGAGCGGCATCTGA 1656 43.12 MVCFGFSSGGLLAYADSQSEDSSPIEECPKKRVLVLGTGWAGTSFLKDLDASKYDVQVVSPQNYFSFTPLLPSVTCGTVEARSIVEPVRNIVKKRKGEVKFWEAECTKIDAANKKVFCRSLVDNNLVGNREFALEYDYLVIAMGAQVNTFNTPGVKENCHFLKEVQDAQKIRKSVIDCFEMAVIPSLSDEERRRNLHFVIVGGGPTGVEFAAELHDFFKEDLVYLYPTVKDLVKISVIQSGDHILNAFDERISSFAEQKFQRDGIDVHTGCRVISVSDKEIKMKVKSSGEVCSIPHGLIVWSTGIMTRPVVKDFMEQIGQGSRRILTTDEWLRVKGTQNVYAIGDCATIDQRKIMKDIAAIFEAADKDNSGTLTVTEFQDVIDDILIRYPQVEIYLRSKHLRDVKDLLKDSQGHEDEVDIEGFKSALSHADTQMKNLPATAQVAAQQGAYLSRCFNRREQCTENPEGPRRFKSSGRYQFLPFRYKHLGQFAPLGGEQAAAELPGDWVSMGRSTQWLWYSVYASKQVSWRTRYLVVSDWTRKFVFGRDSSGI 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8389832 8394392 - Carg19214-RA Car19g00757 167724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00757 551 ProSitePatterns EF-hand calcium-binding domain. 366 378 IPR018247 -
Car19g00757 551 ProSiteProfiles EF-hand calcium-binding domain profile. 353 388 IPR002048 GO:0005509
Car19g00757 551 Pfam Pyridine nucleotide-disulphide oxidoreductase 31 361 IPR023753 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00106 Car19g00757 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01221 Car-Chr7:7476076 Car19g00757 Car-Chr19:8389832 2.49E-12 dispersed
Car19g00757 Car-Chr19:8389832 Car20g00299 Car-Chr20:1732255 6.00E-14 dispersed
Car13g00556 Car-Chr13:7452810 Car19g00757 Car-Chr19:8389832 0 wgd
Car19g00757 Car-Chr19:8389832 Car02g00106 Car-Chr2:670617 0 wgd
Car19g00757 Car-Chr19:8389832 Car03g00429 Car-Chr3:4852125 1.25E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00757 K03885 - csv:101203130 1018.45