Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00768 ATGGGTGGTTGTGTCTCTACAAGCAGCCATAGTACTTGTAGTAGCCAGAGCAATGGGGAATCCGTTTCTTCTTCGTGTATGGGAATTAGATTTCGAGGTCGAAAGCGATCGAACTCCGACCATGTTTATGTTCTTCAGAATCTTCCTTCAGCTCCCAACAGGATCTTCTTGAATGGAAAGAGTAATTCTTCTTGTATTTTCACGCAACAAGGTCGCAAGGGCGTAAACCAGGACGCCATGGTTGTGTGGGAAGATTTCATGTCGGACGACACGATCTTTTGTGGTGTTTTTGATGGTCATGGACCTTACGGTCACCTTGTTTCTCGACGAGTGAGGGATACATTGCCTATAAAGTTGCTGTCGTTTTTTCAGTCTCCTCAGTTGAAGCAGAATGTCTCTGGTAAAACCTGTTTCCAGAGGAATTTGAAGACATCTCGAGAATGTGACGATTCTGAGAAGGATTGTTTTATCGAGGACTCGCAGAATTCGGTATGGCGAGATGCGTTCTTGAACTCGTATAAAGCTATGGATAAGGAGTTGAGATCACATCCTAATCTGGACTGCTTTTGTAGTGGTAGTACAGCAGTCACCATAGTTAAACAGGGGTCAAATCTGTTCATGGGGTACATCGGGGACTCTCGAGCAATCCTTGCCTCGAAGGACGCCAATGATTCGACAGTGGCGGTTCAGTTGACCGTGGATCTTAAGCCAGATTTGCCAAGAGAAGCTGAAAGAATAAAACGGTGTAAAGGTAGGGTGTTTGCATTGCAAGATGAGCCTGAAGTGCCAAGGGTGTGGTTACCTTTCGACGATGCACCCGGTTTAGCCATGGCTCGTGCTTTTGGAGACTTCTGTTTGAAAGAATATGGAGTTATCTCTATACCTGAATTCTCACATCGAACCCTCACCGACGCTGATCAGTTCGTCGTTCTTGCATCAGACGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGACATAGTGTCCTCGGCCTCATCCCGGGCATCAGCTGCGAGATCCGTGGTGGACTCTGCTGCTCGTGAATGGAAACTAAAATACCCGACCTCGAAAATGGATGATTGTGCTGTTGTCTGCTTATTTTTGGATGGGATGATGGACTCCGAATCCGATTGTGATGAACAAGGCTTCTCATCTGCAACGTCGCGTAGTATCCATTCGGGTGCTGCTATTGAATCCGATGATGGCCAGAAGTCTGAGCCATGTCTGCAAAGGAATAACACTGTGAGATCATCTGAGGACAACAAAACTTATGGGGGATTAGCTGATGATGACAGAGAGATTGGTGAAGCTGTACCTGCAGAAGATCAAAACTGGTCGGGTTTGGAAGGCGTCACTCGAGTGAACTCGCTCGTTCAACTTCCTAGATTTTCCGACAAAAGTCCAGTGTCGTAG 1416 46.68 MGGCVSTSSHSTCSSQSNGESVSSSCMGIRFRGRKRSNSDHVYVLQNLPSAPNRIFLNGKSNSSCIFTQQGRKGVNQDAMVVWEDFMSDDTIFCGVFDGHGPYGHLVSRRVRDTLPIKLLSFFQSPQLKQNVSGKTCFQRNLKTSRECDDSEKDCFIEDSQNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFVVLASDGVWDVLSNEEVVDIVSSASSRASAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDGMMDSESDCDEQGFSSATSRSIHSGAAIESDDGQKSEPCLQRNNTVRSSEDNKTYGGLADDDREIGEAVPAEDQNWSGLEGVTRVNSLVQLPRFSDKSPVS 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8444350 8446407 - Carg19226-RA Car19g00768 167735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00768 471 MobiDBLite consensus disorder prediction 1 24 - -
Car19g00768 471 MobiDBLite consensus disorder prediction 424 439 - -
Car19g00768 471 MobiDBLite consensus disorder prediction 396 444 - -
Car19g00768 471 CDD PP2Cc 62 369 IPR001932 -
Car19g00768 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Car19g00768 471 ProSiteProfiles PPM-type phosphatase domain profile. 63 369 IPR001932 -
Car19g00768 471 MobiDBLite consensus disorder prediction 407 422 - -
Car19g00768 471 Pfam Protein phosphatase 2C 164 347 IPR001932 -
Car19g00768 471 SMART PP2C_4 47 367 IPR001932 -
Car19g00768 471 Gene3D - 56 371 IPR036457 -
Car19g00768 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Car19g00768 471 SUPERFAMILY PP2C-like 54 371 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00099 Car19g00768 CCT
Car11g01556 Car19g00768 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01556 Car-Chr11:12414585 Car19g00768 Car-Chr19:8444350 0 wgd
Car19g00768 Car-Chr19:8444350 Car02g00099 Car-Chr2:637029 0 wgd
Car19g00768 Car-Chr19:8444350 Car20g00496 Car-Chr20:2748724 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00768 - - csv:101204594 832.787