Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00780 ATGAATATCAGGCATCTCCGGGAGAGCATCATCATCCTGGCTGGAATGCTTGGCACATACTTGAATGTCTTGGCTCTAGGGCTTTTGTTTCTTCTGTTTTCCAGCTGGTTGGCATATGTTATATTTGAGGATACACAGCAGGGAAAAATAGTATTTACTTCTTTTGGAGCCACATTATATCAAATGTTTATTTTGTTCACTACATCCAATAGTCCAGATGTTTGGATACCTGCCTACAAGGCATCTCGTTGGTATTGTCTCTTTTTTGTTCTTTACGTGCTGTTGGGAGTTTACTTCGTTACAAACTTGATTCTTGCTGTTGTATACGATAGCTTTAAAAGTCAGCTTGCAAAACAAATTTCCGAGATGGATCGCTTGAGGAAAAGTATATTGGCCAAAGCTTTTGGTCTTATGGATACTAATAACGTTGGGTTTATCAATAAAGAGCAGTGCCTTGCACTTTTAGAAGAACTTAACAGATACAGGTCTTTGCCGAAAGTATCAAGGGATGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCGTGATTTTAAGATTAATATGAATGAGTTCGCTGATCTTTGCAATGCTATAGCCTTGAAGTTCCAGAAGGAGGACATTCTTGATATAGCAAACAATGCAGGTCAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTAGTTGAAATGGCTCTAAAAATCTACTCGTTTGGATTTTTGAACTATTGGAGAGATGGCCAAAATCAGTTTGATTTCCTTGTCACGTGGATTATAGTGATTGGAGAAACTATAACTTTCGTTGCACCCAGTGGACTAACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGTTTGATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCTTTTCTTGCTACCTTTTTAACTCTCATCCCTAGTTTGATGCCATATCTAGGAACCATTTTCTGTGTCCTCTGTCTTTATTGCACACTTGGTGTGCAGGTCTTTGGAGGACTTGTTAATGCTGGAAATGCCACTTTGTCTCTGACTGATCTGGATGAGGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACACTGTTCAATTTGCTAGTTATGGGAAACTGGCAAGCCTGGATGCAGAGCTACAAGGAATTAACAGGAAGCATTTGGACCCTCGTTTATTTTATCAGTTTCTACCTAATAACCGTTTTGCTGCTCTTAAATTTGGTTGTAGCCTTTGTCTTGGAGGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGCGAAGAACAGGATCAGGACGGAGATAGTAGAAAGGATCGTCGACGTTTTGTTGGCACTAAAACTCGGAGTCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCCGAACTGGATAAGAATTCCGATTAG 1461 39.49 MNIRHLRESIIILAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTQQGKIVFTSFGATLYQMFILFTTSNSPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFGLMDTNNVGFINKEQCLALLEELNRYRSLPKVSRDDYELIFDELDDSRDFKINMNEFADLCNAIALKFQKEDILDIANNAGQKAWQELEFVFGWIYVVEMALKIYSFGFLNYWRDGQNQFDFLVTWIIVIGETITFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGLVNAGNATLSLTDLDEDDYLLFNFNDYPNGMVTLFNLLVMGNWQAWMQSYKELTGSIWTLVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQDQDGDSRKDRRRFVGTKTRSRKVDILLHHMLSAELDKNSD 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8494629 8508056 + Carg19238-RA Car19g00780 167747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00780 486 MobiDBLite consensus disorder prediction 446 461 - -
Car19g00780 486 Pfam Ion transport protein 7 115 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car19g00780 486 Pfam Ion transport protein 196 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car19g00780 486 ProSiteProfiles EF-hand calcium-binding domain profile. 126 161 IPR002048 GO:0005509
Car19g00780 486 MobiDBLite consensus disorder prediction 442 461 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01567 Car19g00780 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01567 Car-Chr11:12457265 Car19g00780 Car-Chr19:8494629 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00780 K16900 - csv:101206980 847.81