Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00784 ATGTCTTCTTCTTCTTCTTCTTCTTCTTCACGCAGTTTCTTCTGCGCTGTATTTTCGCTTCTAATCTCCATTTCCATCTCAGTCTCGGCTACAGAGTTCGTCTTCAACACCAATTTCACTTCCACTAATACTTTGCTCTTCGGCAACGCCACAATTGAGTCTTCTGTTCTTATTCTCACTAGAGATACCCCTTTCTCCATCGGCCGTGCCCTTTACCCCTTTAAGATTCCCATCTTTTCCTCCAATTCTTCATTTTCCTTTGCAACTTCTTTCATCTTTTCTGTCACCCCTCAGCCAAATCTTCTCCCCGGCCATGGATTTGCCTTTCTCTTCACACCCTCTACTGGAATCAATGGCACCAGCTCGGCTCAGCATTTGGGGCTTTTCAATTTCACCAATAATGGCAGCCCCAATAACCATGTCTTCGGTGTTGAGTTCGACACTTTCCAAAATCAAGAGTTCAATGACACCAATGATAACCATGTGGGCGTGGATTTGAATTCTCTCCAGTCCACTGTTTCCGCTGCAGCAGGGTTTTGGAGTGGACCAGATGATGGAGAATTCAAGCAGCTGGAGATCAATAATGGAGAAACTTATCAGGTTTGGATTGAATGTCTAGATTCTTTGCTTAATATTACAATGGCTGAAGTGGGAGTGAAAAAACCTAGAAAGCCATTGATTTCTCTGTCTGTTAATTTTTCTGGATTGCTTTTGGATAAGATGTATGTGGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGCTTTAGTTCCACTAACTTTTCTATTGCTGATGCTTTAGTGATAACGAATTTGCCATCTTTTGCTCCTCAAAAGCTGGGCTCCATTTTTGAGTCAATATCTTTCATATTGGGGATAACCGTGGGTGGTGCTGGACTTGTAATTCTATGTAGTGTTGTTGTTGTAATTACCAAAAGAAGGGGACGAAAGAAACCAAAGGATGATGAAATTGAAGAGTGGGAGTTAGAATATTGGCCGCATCGGTTTGCTTATGAAGATGTTTATGAAGCAACTGATGGGTTCTCAGAAGGCAATGTGATTGGGTTTGGGCGCAATGGGAAGGTCTACAAAGGGACCTTAGGGAGATCAAAAGTTGCTGTGAAGAGAATCTGTGTTGAAGGTGAGAGTGGGATGAGGGAGTTTGTGGCTGAGATTTCAAGCCTGGGAAGATTACAGCATAGAAATCTTGTGAAGCTTATAGGATGGTGTAAGAAGGAGAAAGGAAGCTTAATCTTAATGTATGATTACATGGAAAATGGAAGTCTAGACAAGAAGCTATTCGAGTGTGATGAGAATGCAATGCTGAGTTGGGGGGAAAGGATGAAGGTTTTGAGAGATGTAGCCACTGGGCTGCTATATCTGCACCAAGGTTGGGATTACAAGGTTCTACATAGAGATATAAAGCCCAACAACGTGCTACTCGACAAGGACATGAATGCAAAGTTAGGAGACTTTGGGTTGGCTCGAATGCAACCCCATGAGAAAACGGCAGACACAACTCAAGTGATGGGAACCGTTGGGTATATGGCACCAGAGGTGGTTCGAACAGGTCGAGTATCGGCACAGGCAGACGTTTTTGGGTTCGGGGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAGGGGAAGCCATGGTTGATAGATTGGGTAATGGAGAGGAATGAGGTTGGATTTGTAGTTGACGAGAGATTGAAAGTTGGTGGGAATGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGGTTATTGTGTGCGCAGCCTGAGGCTGGTTCAAGGCCAACAATGCAACAAGTTGTGAACATTTTGTGTGAGGGAAATGGAAACGGAAATGGTTCAAATGATGGATTGTTGAACAGATTAAGATCAACAAGAGCACTGTCTGAGATTTATGGAGGCAACCATTGCCAGCAGCATCCAACCTTTGAACAAATCAAAACATCTTCCTCTTCAACATCTCTCGTTGATTCGGATATTTTAAGGATTGGCCGCTAG 2043 43.27 MSSSSSSSSSRSFFCAVFSLLISISISVSATEFVFNTNFTSTNTLLFGNATIESSVLILTRDTPFSIGRALYPFKIPIFSSNSSFSFATSFIFSVTPQPNLLPGHGFAFLFTPSTGINGTSSAQHLGLFNFTNNGSPNNHVFGVEFDTFQNQEFNDTNDNHVGVDLNSLQSTVSAAAGFWSGPDDGEFKQLEINNGETYQVWIECLDSLLNITMAEVGVKKPRKPLISLSVNFSGLLLDKMYVGFTAATGQLVQSHKILSWSFSSTNFSIADALVITNLPSFAPQKLGSIFESISFILGITVGGAGLVILCSVVVVITKRRGRKKPKDDEIEEWELEYWPHRFAYEDVYEATDGFSEGNVIGFGRNGKVYKGTLGRSKVAVKRICVEGESGMREFVAEISSLGRLQHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECDENAMLSWGERMKVLRDVATGLLYLHQGWDYKVLHRDIKPNNVLLDKDMNAKLGDFGLARMQPHEKTADTTQVMGTVGYMAPEVVRTGRVSAQADVFGFGVLVLEVVCGRRAIEEGKPWLIDWVMERNEVGFVVDERLKVGGNEIDEMERMVCLGLLCAQPEAGSRPTMQQVVNILCEGNGNGNGSNDGLLNRLRSTRALSEIYGGNHCQQHPTFEQIKTSSSSTSLVDSDILRIGR 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8513560 8515602 + Carg19242-RA Car19g00784 167751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00784 680 Pfam Legume lectin domain 31 267 IPR001220 GO:0030246
Car19g00784 680 Pfam Protein kinase domain 356 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00784 680 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Car19g00784 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Car19g00784 680 ProSiteProfiles Protein kinase domain profile. 355 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00784 Car20g00175 CCT
Car02g00082 Car19g00784 CCT
Car19g00784 Car20g00175 ECH
Car02g00082 Car19g00784 ECH
Car11g01570 Car19g00784 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00784 Car-Chr19:8513560 Car14g00102 Car-Chr14:521162 1.04E-156 dispersed
Car11g01570 Car-Chr11:12476942 Car19g00784 Car-Chr19:8513560 0 wgd
Car13g00526 Car-Chr13:7275249 Car19g00784 Car-Chr19:8513560 0 wgd
Car18g00348 Car-Chr18:2145325 Car19g00784 Car-Chr19:8513560 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89575 PF00069 Pkinase 1.10E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00784 - - csv:101216388 1082.4