Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00787 ATGAGCAGTGTTTGTGCTGAGGAGCAGAAATTTCAGTTTCAATTTCAACTGCCTTCTTCTTGTTCTTCGATTATTGAGGACATTAACGGTGAAATGTGCTCTGATTCGCCGCGATTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTTAACGGCGAGGATGTAGCGGAGGAAGACGGTGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGTGGCGGTGTACTCGTAGTCGGAGCCATGACTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCGCGGCGACGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGATTTTCGACGCGGCGGTTGTGACCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTCGAGTGTTGGCTTCATCCAGCGAGATATCGGACCGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTACCGCCGGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCGCCGAATAAGAGGAGTTCTACTCTCAGATCGGCCGCCGCTGGTTCGAACCACGGCTGTTTATTTTGCCATTGCGGCGGAGCCGCCACTTCCTCGCCGACATCGACGCTTATCGGAATGTCTCATCTCTCTCCGCCACTCTCTCCGCCACTCTCGCCTGTAAAACCTCAGTCGCTAAATGGATTTTCATCGATTTCAAGGTACAATCCAGATCCGTCTAAGTTAAATGGAGTAATAAGTTATAAAGATTCAATGGCCGAGCTCATGAACTCCATTGAATCCATGAATATCGACGAATTGAACGCCGCTTTAGCCGCCTCCGCCTCAAGACAAACGATTCCTTGGATCGATGTTTCGTCTCTCAACACTGAAGATCAACTCCAGTTTGTTCTCTCACCTTCCACTCCAAATGTCTCCGCCACATCGATGAACTTTTCCGTCAATAACAAAGGTAACGCCGACAATGGCTGGGCCTCCGCCTCCGCCTCCGCCTCCGATCCAGATCTCGGATGGGTTAACGATCTTCTGATGTAA 1092 49.08 MSSVCAEEQKFQFQFQLPSSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPLSPPLSPVKPQSLNGFSSISRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASASRQTIPWIDVSSLNTEDQLQFVLSPSTPNVSATSMNFSVNNKGNADNGWASASASASDPDLGWVNDLLM 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8548602 8549693 + Carg19245-RA Car19g00787 167754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00787 363 ProSiteProfiles Zinc finger C3H1-type profile. 111 137 IPR000571 GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00622 Car-Chr10:3158837 Car19g00787 Car-Chr19:8548602 1.73E-66 dispersed
Car12g01256 Car-Chr12:11829776 Car19g00787 Car-Chr19:8548602 7.44E-66 dispersed
Car19g00787 Car-Chr19:8548602 Car14g00415 Car-Chr14:2109824 2.38E-59 dispersed
Car16g00191 Car-Chr16:1093027 Car19g00787 Car-Chr19:8548602 1.76E-53 transposed
Car11g01598 Car-Chr11:12640412 Car19g00787 Car-Chr19:8548602 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5305 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00787 K23047 - csv:101211149 560.836