Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00788 ATGATGAAGCGTTATGTTTACATCAACGACGATGAACCATCAAATGATCTTTTTTGCGATAACCGCATCTCGAACCGGAAATATACATTATTGAACTTTCTCCCTAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAATACTTTTTGTTAATTGCATGCCTACAGTTGTGGCCGCTTATAACTCCAGTTAACCCTGCCAGTACGTGGGGTCCACTTATTTTCATTTTTGCCGTGTCTGCAACAAAAGAGGCATGGGATGATTACAATAGATATTTATCGGACAAAAAGGCTAATGAGAAAGAAGTTTGGGTTGTGAAGCAGGGTACCAGAAAAACTATTCAAGCACAAGATATTCATGTTGGTAATTTAGTATGGCTCAGGGAGAATGATGAAGTGCCTTCTGATCTTGTTTTGATTGGTACCTCTGATCCTCAAGGAATTTGCTATATAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCTTGCATGGGAATAGATTTTGATCTATTAAACAAAATCAAGGGAGTTATAGAGTGTCCTATACCTGATAAGGATATTACAAGATTTGATGCAAACATTCGGTTATTTCCTCCTTTCATCGATAATGATGTGTGCCCTTTGACAATAAAAAACACAATTCTTCAGTCATGTTACTTGCGGAACACAGAGTGGGTCTGTGGAGTAGCCGTCTACACAGGCAAGTGCATCTGCATGAGATTCCTAGTTCATATAAACTATTCACCAAATAATTATTGTTTTCTTCATGGCAATGAAACCAAGCTTGGAATGAGCAGGGGTGTCCCAGAACCAAAACTTACGGCTATGGATGCAATGATCGACATGTTAACTGGTGCTATATTTGTTTTTCAACTTGTGGTGGTGGTTATTCTAGGTATAGCTGGTAATGTGTGGAAGGATTCTGAAGCCCGAAAGCTATGGTATGTGCAACATCCAGAGGAAGGTCCATGGTATGAGCTACTGGTTATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATTCCCATTTCAATTAAGGTGTCTCTGGATCTTGTAAAGAGCTTATATGCAAAATTTATTGATTGGGACCATGATATGATTGACTACGAGTCTGGTATTCCTTCCCATGCTACAAATACAGCAATAAGCGAGGACCTGGGACAAGTCGAATACATTTTGACCGATAAAACTGGTACCCTCACTGAAAATAAGATGATCTTCAGGAGATGTTGTATCAGTGGCATTTTTTATGGAAATGAAAATGGAGATGCCTTGAGAGATGAAAAGTTGCTCGATGCTATTGCAAGCAGCTCTCCGGATGTTATAAGATTTCTCACAATTATGGCAATATGTAATACAGTGGTGCCTACAAAAAGCAAATGTGGAAATATCGTGTACAAGGCACAATCACAGGATGAGGAGGCTCTCGTGAATGCTGCTGCTTATTTGAATATGGTATTTGTCAATAAGAATGCTAATATTCTAGAAATTCAGTTTAATGGGATGCTAAATAGATACGAGCTCCTAGATACACTCGAGTTCACATCTGAACGAAAAAGAATGTCTATGGTCGTTAAAGATTGTCAGAATGGGAAGATTGTCCTCCTGTCTAAAGGAGCAGATGAGGCTATACTTCCTCATGCTTATGCTGGCCAGCAAACGAGAACATTTATGGAAGCCGTGGATCAGTATGCACAACTGGGTCTCCGCACATTATGTCTGGCTTGGCGTGAACTTGAGGAAGATGAGTATCGAGAATGGGCTCTTATGTTTAAGGAGGCTAATAACACATTGGTTGATAGGGAGTGGAGGTTAGCTGAAGTTTGCCTAAGAATCGAGCGCAATTTTGAAGTTCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCTGAAACAATTGAAACATTGAGAAGAGCAGGAATAAATTTCTGGATGCTGACCGGAGACAAGCAGAACACTGCCATTCAGATAGCTCTTCTATGCAACTTTATTTCACCAGAGCCCAAAGGACAGTTACTGTTAATTGATGGAAAAACGGAGGACGAAGTTTGTAGAAGTTTGGAGAGAGTTGTTCTAACTATGAAGACCACAACCTCAGAACCCAAGGATGTTGCTTTCGTTGTTGATGGCTTGGCTCTGGAAATTGCTCTGAAGAATCATCGTAGGGCTTTCACTGAATTAGCAATACTATCAAGAACCGCAATATGTTGTCGTGTGACTCCATCACAGAAGGCTCAGCTTGTGGAACTCTTAAAATCATGTGATTATCGAACACTGGCGATTGGAGATGGTGGGAATGATGTGAGGATGATTCAGCAAGCTGACATTGGAGTTGGCATTAGTGGAAGAGAAGGACTGCAGGCAGCTAGGGCAGCTGATTATAGTATTGGAAAGTTCAGGTTTCTGAAAAGATTGATTCTAGTTCATGGACGATACTCATACAACCGTACAGCATTCTTGTCACAATATTCTTTCTATAAATCCTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATATCAGGTGTCTCTGGGACCAGTCTCTTTAATTCTGTTAGCTTGATGGCTTACAATGTTTTCTACACCAGTATCCCTGTATTAGTTAGCGTTCTCGACAAGGATCTCAGCGAAGAAACTGTGATGCAACATCCTCAGATTTTATTTTACTGCCAAGCTGGGAGGCTCTTAAATCCCAGCACATTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCTGTTGTCGTGTTTGTAATTAGCATACATGCCTACGCTAATGAAAAGAGTGAAATGGTGGAGGTTTCAATGGTGGCACTATCTGGGTGCATTTGGTTACAGGCTTTTGTAGTGACTTTGGAGACCAATTCATTCACAATGTTGCAACTTATTGCCATATGGGGGAATTTAGCTGCTTTCTACGTAATCAATTGGATCTTCTGCGCCATTCCTTCATCTGGGATGTATACAATAATGTTCCGCTTATGCGGACAGCCATCTTATTGGATAACCGTATTTCTAATAGTAGGCGTGGGAATGGGCCCACTTTTAGGCATCAAATACTTCAGATATACATACAGACCAAGCAAAATCAACACTCTTCAGCAGGCTGAACGTTTAGGTGGGCCGATCCTGTCGCTAAAAAACATTGAGCACCAGCCTCGGCCCATTGATGAGAAAGAAGATTCTCCACTGTTAATATCCCAGCCCAATAACAGAAATACAGTTTTCGAACCTCTATTATCAGACTCTCCAACTGCTGCTACTAGAAGATCTCTTGCTTCAAGATCCTCCTTTGATTTCTTTCAGACACCGCCCAGTTATTCAATAAATAAGGATAAGTGA 3381 40.82 MMKRYVYINDDEPSNDLFCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKTIQAQDIHVGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPIPDKDITRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWVCGVAVYTGKCICMRFLVHINYSPNNYCFLHGNETKLGMSRGVPEPKLTAMDAMIDMLTGAIFVFQLVVVVILGIAGNVWKDSEARKLWYVQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHDMIDYESGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALRDEKLLDAIASSSPDVIRFLTIMAICNTVVPTKSKCGNIVYKAQSQDEEALVNAAAYLNMVFVNKNANILEIQFNGMLNRYELLDTLEFTSERKRMSMVVKDCQNGKIVLLSKGADEAILPHAYAGQQTRTFMEAVDQYAQLGLRTLCLAWRELEEDEYREWALMFKEANNTLVDREWRLAEVCLRIERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGLALEIALKNHRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTMLQLIAIWGNLAAFYVINWIFCAIPSSGMYTIMFRLCGQPSYWITVFLIVGVGMGPLLGIKYFRYTYRPSKINTLQQAERLGGPILSLKNIEHQPRPIDEKEDSPLLISQPNNRNTVFEPLLSDSPTAATRRSLASRSSFDFFQTPPSYSINKDK 1126
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 8552621 8563748 - Carg19246-RA Car19g00788 167755
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car19g00788 1126 Pfam E1-E2 ATPase 100 162 - -
Car19g00788 1126 ProSitePatterns E1-E2 ATPases phosphorylation site. 405 411 IPR018303 -
Car19g00788 1126 Pfam Phospholipid-translocating ATPase N-terminal 6 71 IPR032631 -
Car19g00788 1126 Pfam Phospholipid-translocating P-type ATPase C-terminal 802 1041 IPR032630 -
Car19g00788 1126 Pfam Cation transport ATPase (P-type) 460 557 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00788 Car-Chr19:8552621 Car07g01175 Car-Chr7:7105232 0 dispersed
Car11g01597 Car-Chr11:12626969 Car19g00788 Car-Chr19:8552621 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00788 K01530 - csv:101210900 2051.56