Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car19g00792 | ATGCCGCAAAACTCCATAAATAAGTCACCGAGCGAACAGGTTATCTCTATCCTTAACACGCTTTGTGCAGATGCAAAAAATGTCGTCTTCATTGTGAGTGGACGAGGAAGGGACAGCTTAAGCAAGTGGTTTCGCCCATGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATTTCTTGAGGCAGTCACAAAATGAGGAGTGGAAGATCTGCGGCCAAAATTCTGATTTCGGATGGATGCAGATAGCCGAACCTGTTATGAAATTATACACCGAGGCTACTGATGGTTCATCAATCGAACGAAAGGAAAGTGCTTTGGTTTGGCAGTATCGAGATGCAGATCCTGGCTTTGGATCGTCCCAGGCGAAGGAGATGTTGGATCATTTAGAGAGTGTTTTGGCAAACGAACCTGTTGCAGTCAAAAGCGGCCAATTTATTGTAGAAGTGAAACCACAGGGGGTTACCAAAGGCCTAGTGGCTGAAAAAATCTTCTCATCAATGGCAGAGGATGGGAACCTCGCCGACTTCGTGTTGTGTATAGGCGACGACAGATCGGACGAGGACATGTTCGAAATAATTGGTAATGCGTTGTCCAGTAATAATATTCTTTCTCCAACGGCGTCAGTTTTTGCCTGCACTGTTGGGCAAAAGCCAAGCAAAGCCAAATATTACTTGGACGACACAGCTGAAGTAATAAGCATGCTTGAATACCTGGCCGAAGCTTCTAGCCCATTGCCATCCTCTGAAGATGAAGAAGGTCAAAACGCTTCTTGA | 774 | 45.48 | MPQNSINKSPSEQVISILNTLCADAKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYFLRQSQNEEWKICGQNSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVTKGLVAEKIFSSMAEDGNLADFVLCIGDDRSDEDMFEIIGNALSSNNILSPTASVFACTVGQKPSKAKYYLDDTAEVISMLEYLAEASSPLPSSEDEEGQNAS | 257 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 8586811 | 8590394 | - | Carg19250-RA | Car19g00792 | 167759 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car19g00792 | 257 | Pfam | Trehalose-phosphatase | 4 | 228 | IPR003337 | GO:0003824|GO:0005992 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car11g00104 | Car-Chr11:595269 | Car19g00792 | Car-Chr19:8586811 | 3.73E-70 | dispersed | |
| Car06g00576 | Car-Chr6:3308313 | Car19g00792 | Car-Chr19:8586811 | 8.72E-79 | transposed | |
| Car18g00415 | Car-Chr18:2600958 | Car19g00792 | Car-Chr19:8586811 | 1.35E-23 | wgd | |
| Car19g00792 | Car-Chr19:8586811 | Car03g01201 | Car-Chr3:9431037 | 3.22E-140 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car19g00792 | K16055 | - | csv:101209914 | 494.197 |