Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00804 ATGTTATCTGGAAGGTTGATTGAAGGGTGCGTTCAGAATGAACAGAAGGTGTTTGTTGAAATGATTCAGTACAACCACATGATTTCATTGAGGAATTTGATGGAAGAGAAACAGCTGGATTTGAATCAACCTCTTCTTTCTGTGAGGCGTTTTACATCCACAGGAACATCATCCAAGACTAATGAAAAAGCCAGACCTGAACCCGAAATTCCTCGTCCTCCTGTATATAAATCAGAATTGAAATCTGGTCCAGTGAGGAATCCTGGAACTGTTCCTTTTGTATGGGAGCAAACTCCAGGAAAACCCAAGGATGAAAGCACTGTGACTCAGAGTTCCAAACGGCCTCCACTTGTCCCAAAACTCCCACCTGGAAGAGCCCAAAAAATGAATCAAGAAGTTCCTACTTCTATAAATGCTTCATTAGATGAAAATGCCAGAGAAACAGTTGAAGAGATGACCAGCTGTAAGTCAGGAAATGACGACGAAGAAGAAGATGATGAGGTTTACAGAGATGCAAACGATATATTTTCTCGATCCGAATCGTTCTTCTTGAATTGTAGTATTAGTGGAGTGAGTGGATTGGATGATTCTGAAATTAAACCTTCAGGAGTCTCCTCCATGGATCCACATACTAGGAATTTCATGATGGACCGGTTTCTACCTGCAGCAAAGGCAATGGCATCAGAAACACCTCCACATACTATTAGAAAACAAACTGTCGAGCGACCGAGGGAAATAAAATTGGTGACAAATGGGGATAGGCAGAGTCGGCCGAACCTGCACGTTCAGACACAACATGTAAAAGAAATATTCAGGGAAGAAAGTGATGATGAAGATGATGATTTTGATGAGTCTGAATATGCTTCCACTCGGGGATGTGGTTTTCTTCCTCGGTTTTGCTTAAAAGGTTCACTTGTTCTTTTAAATCCAGTACCTGGAATGAGAATGCAGGCCACTTCGGTGCGCCGAGTTCGTAATAGCTCAACTGGGAGTTCCAAGGATGCTGTAAATGAGAGACGATCAAGTCATGGTCAAGGAATAACTCGGCAGAAGCTCGAAGAAAATGCAAGTAATATTCAGGAGATCGATACATTTTCTTTATACAGACATTTGCAGGGCGAGGGCATATCCAAATACCCAAATGAACCTTCCCAGGCTGTTCATGGAAATGTAAATCCTTCTCTTGGTTACACTGTAAAGGCTACCAATTCTGTGACGAATGAATACGACGAACCACGTCGAAGAAGCCTAAATAGCTTTCATGCATTACTGGGTGACGAGTCGGGTTCAGCTAGTCCTGTAGAGAAAACTCTGTACATAGACTCTGTTCATAAAATCACATCTCCTGACTCAAGTTCAAATTCTTTGGATAGGAAGGGGATAAGTTACAGTGGAGATATGATTGATGATGCTTCGATAAAAAGCACCGAAATTAAAGAACTGTGTAAACTGGATTCTGAAACCCAAGATGTCAAGAATTTGAATGCTGTTGGCGAAAAAAGTACTCTGAGACCTGACAGTTTGAAATCTATGGATTCCTGCTTGCTCACTTGCTCGAATAGATCATTGTTTGAGGTAAAAGTAGATTCAAATTTCTCCAGGCTCAAACCAGAACATACTCAGGATGCTGCGAAGGCGACAAGCTCACAATTCGCTAACAACAAGAAGTTTAATCTGGAAAACCAATTTCCCTTGAAGCCGAGCAGCCGAGGCGATGCGAATGGTCTTGCTAAAGATAACACTACATTTGTATCCTCATATGGAATTCACAGTGAGAAGGTTAATTTAGACAGGAAACAACCTGAGAAGTCTGTTTATGGAAGGAATAACGTAATCGTTCCAGAATATGGCAAGAAGCACGAGTCGGATGGCGAAAAGCTTGCTCCTGTTGAGGACTCCCCTGGTCTGAGAACTTCAGAACGTGCTACCAATGGAGAGAAGGATTCAAGAAATCAACTTCTCAAGAGGGTAGGTAATGAAGATGGTTCTCGCGGTGGCTACTCACAGTCGCGGCTGCGTTTTGCTCCGCCTCCGCCAAAATCTCCATCAGAATCTTGGTTGAAACGTACTTTGCCAACTTCTTCAAGAAACACAGTTTTTTTGCAGTCATTCTTTTGCAATGCAGGTTAA 2130 42.25 MLSGRLIEGCVQNEQKVFVEMIQYNHMISLRNLMEEKQLDLNQPLLSVRRFTSTGTSSKTNEKARPEPEIPRPPVYKSELKSGPVRNPGTVPFVWEQTPGKPKDESTVTQSSKRPPLVPKLPPGRAQKMNQEVPTSINASLDENARETVEEMTSCKSGNDDEEEDDEVYRDANDIFSRSESFFLNCSISGVSGLDDSEIKPSGVSSMDPHTRNFMMDRFLPAAKAMASETPPHTIRKQTVERPREIKLVTNGDRQSRPNLHVQTQHVKEIFREESDDEDDDFDESEYASTRGCGFLPRFCLKGSLVLLNPVPGMRMQATSVRRVRNSSTGSSKDAVNERRSSHGQGITRQKLEENASNIQEIDTFSLYRHLQGEGISKYPNEPSQAVHGNVNPSLGYTVKATNSVTNEYDEPRRRSLNSFHALLGDESGSASPVEKTLYIDSVHKITSPDSSSNSLDRKGISYSGDMIDDASIKSTEIKELCKLDSETQDVKNLNAVGEKSTLRPDSLKSMDSCLLTCSNRSLFEVKVDSNFSRLKPEHTQDAAKATSSQFANNKKFNLENQFPLKPSSRGDANGLAKDNTTFVSSYGIHSEKVNLDRKQPEKSVYGRNNVIVPEYGKKHESDGEKLAPVEDSPGLRTSERATNGEKDSRNQLLKRVGNEDGSRGGYSQSRLRFAPPPPKSPSESWLKRTLPTSSRNTVFLQSFFCNAG 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8680649 8684130 + Carg15729-RA Car19g00804 167771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00804 709 MobiDBLite consensus disorder prediction 129 143 - -
Car19g00804 709 Pfam Protein of unknown function (DUF688) 34 459 IPR007789 -
Car19g00804 709 MobiDBLite consensus disorder prediction 51 166 - -
Car19g00804 709 MobiDBLite consensus disorder prediction 616 630 - -
Car19g00804 709 MobiDBLite consensus disorder prediction 641 657 - -
Car19g00804 709 MobiDBLite consensus disorder prediction 319 349 - -
Car19g00804 709 MobiDBLite consensus disorder prediction 542 577 - -
Car19g00804 709 MobiDBLite consensus disorder prediction 616 692 - -
Car19g00804 709 MobiDBLite consensus disorder prediction 320 335 - -
Car19g00804 709 MobiDBLite consensus disorder prediction 538 577 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00804 Car20g00184 CCT
Car02g00071 Car19g00804 CCT
Car19g00804 Car20g00184 ECH
Car02g00071 Car19g00804 ECH
Car11g01493 Car19g00804 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00804 Car-Chr19:8680649 Car03g00296 Car-Chr3:4038042 2.19E-06 dispersed
Car11g01580 Car-Chr11:12543503 Car19g00804 Car-Chr19:8680649 1.15E-23 wgd
Car13g00484 Car-Chr13:7057257 Car19g00804 Car-Chr19:8680649 9.25E-34 wgd
Car18g00393 Car-Chr18:2425550 Car19g00804 Car-Chr19:8680649 1.34E-34 wgd
Car19g00804 Car-Chr19:8680649 Car02g00071 Car-Chr2:464718 1.73E-60 wgd
Car19g00804 Car-Chr19:8680649 Car20g00184 Car-Chr20:1021904 2.42E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00804 - - csv:101218044 1032.32