Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00808 ATGGCTTCCAGTAAAGAACGCGAGAACTTCGTTTACGTCGCTAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGAAGCAATGAAGAATGTTGCAAAGCTTGAGGTTGAATTGACAGTTGAGGAAAGAAACTTACTTTCTGTTGGATACAAGAATGTGGTTGGTGCACGGAGAGCCTCATGGAGGATCTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCTAAACGCATCAAGGAATACAGACAAAAGGTTGAAACAGAGCTCTCTGGTATTTGTGATGATATCATGACAGTGATTGACGAGCACCTAATTCCATTGGCTTCAGCTGGGGAATCAACAGTGTTCTACTATAAGATGAAAGGAGACTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGAAGCAGCTGATCAATCGATGAAGGCATATGAGGCTGCAACCAGCTCAGCCGAATCTGAATTACCCCCCACACATCCTATCCGTTTGGGTTTGGCATTAAATTTCTCAGTCTTCTATTATGAAATCCTGAATTCACCCGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGAAGCCATCTCCGAACTTGACACCCTTAACGAGGAGTCATACAAAGATAGCACCTTGATCATGCAGCTTCTTAGGGACAACCTTACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGATCAATGGAACTGCCAAGATTTCTGGTGGTGACGATGCCGAGTGA 786 43.64 MASSKERENFVYVAKLAEQAERYDEMVEAMKNVAKLEVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVETELSGICDDIMTVIDEHLIPLASAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTAKISGGDDAE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8705985 8709165 + Carg15725-RA Car19g00808 167775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00808 261 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Car19g00808 261 MobiDBLite consensus disorder prediction 242 261 - -
Car19g00808 261 PIRSF 14-3-3 1 247 IPR000308 -
Car19g00808 261 Coils Coil 13 46 - -
Car19g00808 261 Coils Coil 195 215 - -
Car19g00808 261 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 3 246 - -
Car19g00808 261 SMART 1433_4 7 248 IPR023410 -
Car19g00808 261 Pfam 14-3-3 protein 14 235 IPR023410 -
Car19g00808 261 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Car19g00808 261 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Car19g00808 261 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Car19g00808 261 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Car19g00808 261 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Car19g00808 261 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Car19g00808 261 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Car19g00808 261 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Car19g00808 261 PANTHER 14-3-3 PROTEIN 3 246 IPR000308 -
Car19g00808 261 Gene3D - 1 249 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01226 Car-Chr1:11259232 Car19g00808 Car-Chr19:8705985 7.87E-136 dispersed
Car05g00394 Car-Chr5:2246930 Car19g00808 Car-Chr19:8705985 1.36E-71 dispersed
Car12g00098 Car-Chr12:528217 Car19g00808 Car-Chr19:8705985 1.86E-147 dispersed
Car11g01576 Car-Chr11:12512982 Car19g00808 Car-Chr19:8705985 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00808 K06630 - csv:101208446 486.108