Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00816 ATGGAGGAGGAGAAGACGGCCGCGACGACGCAATGCTGCCGCCGTGCCGGACCTCCGAAACCTCAGAGATATTCTGGCAAACGCCGTCTCTTGATCTTCCTCTCCTTCTCTGTTCTCTGGAACTTTGCAGCCGGAGCTTTTGATTACGCTGATGCTCTGTCCAAGAGCCTCCTCTACTTCGAGTCTCAGCGATCGGGAAGGCTGCCGTACAACCAGCGCGTCAACTGGCGAGACCATTCCGGCCTCACCGACGGGCTTGAACAAGGAGTTAGTTGCTCTAAATCTGCAATAGCTGCTCTGGTGGATTTAGTCGGAGGATATTATGACGCCGGTGATCACGTCAAGTTCGGCCTCCCAATGGCCTTCACTATAACGATGCTATCCTGGAGCGTCATCGAGTACCGACAAGAAATTGAAGCCGCCGGTGAATTAGGGCACGCTCTAGAGGCGATCAAGTGGGGAACCGATTACTTCATCAAAGCGCACACTAGCCCCAATGTGCTATGGGCAGAGGTTGGCGATGGAGATACGGACCATTACTGCTGGCAGAGGCCGGAGGACATGACGACGTCACGACAAGCTTACAAAATCGACGAGAGGAAGCCGGGGTCAGATCTCGCCGGAGAAACGGCGGCGTCGATGGCTGCAGCGTCGATCGTGTTCAGAAAAACGAACTCACATTACTCGCACCTGCTGCTCCATCACGCGCAACAGTTGTTTGAGTTTGGGGATAAATTCAGAGGGAAATATGACTCAAGTGTGGGAATAGTGAAGAGCTACTACGCGTCGGTGAGTGGGTATAAAGATGAACTTCTATGGGCTGCGCTGTGGCTCTATGAGGCCACCGACAATCCACACTATCTTGAGTACGTCCTTAACAACGCTCACAGCTTCGGTGGCATTGGCTGGGCCATCTCCGAGTTCAGCTGGGACGTCAAGTATGCTGGCGTCCAACTCATGGCCTCCAAGGGGAGGCACAATAAGAACAATGAGCAAGCAAAAATCCTGGAGCAGTACCGATCAAAAGCAGAGTATTACCTCTGCACGATCCTCAACAAGAACAATGTCAGCAACGTCGAGAGAACTCCGGCTGGCCTTTTATTCATCCGCCAGTGGAACAACATGCAATACGTCTCTACGGCGTCGTTTCTTCTCACTGTCTACTCCGACTACCTCCGCCGATCCAACCACCGTCTCAACTGCCACACCGGACCCGTGGATCACGAAGAGCTTTTTGCCTTTGCAAAACAACAAACGGATTACATACTCGGCTCCAACCCAATGAACATGAGCTATTTGGTCGGATTTGGCCCCAATTTTCCTACTAGGGTTCACCACAGAGGAGCCTCCATTATGTCGCATAGAGAAAACAAGGCGTTCATCGGCTGCACACAGGGCTACGACAATTGGTACGGCCGTGGAGATCCGAACCCAAACGTCGTCGTTGGGGCGGTGGTTGGCGGCCCGGATTGCGAAGACAAATTTTCCGATGATAGAGGGAACTACATGCAGACCGAGGCCTGCACCTACAATACAGCGCCGTTGGTCGGCGTTTTTGCTAAATTATCAAGTTTGGAGCACCGGATCCAGGTCGAACCCGAGACGACCCGCTCCTATATGCTTCATACAACAAAC 1635 52.84 MEEEKTAATTQCCRRAGPPKPQRYSGKRRLLIFLSFSVLWNFAAGAFDYADALSKSLLYFESQRSGRLPYNQRVNWRDHSGLTDGLEQGVSCSKSAIAALVDLVGGYYDAGDHVKFGLPMAFTITMLSWSVIEYRQEIEAAGELGHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRQAYKIDERKPGSDLAGETAASMAAASIVFRKTNSHYSHLLLHHAQQLFEFGDKFRGKYDSSVGIVKSYYASVSGYKDELLWAALWLYEATDNPHYLEYVLNNAHSFGGIGWAISEFSWDVKYAGVQLMASKGRHNKNNEQAKILEQYRSKAEYYLCTILNKNNVSNVERTPAGLLFIRQWNNMQYVSTASFLLTVYSDYLRRSNHRLNCHTGPVDHEELFAFAKQQTDYILGSNPMNMSYLVGFGPNFPTRVHHRGASIMSHRENKAFIGCTQGYDNWYGRGDPNPNVVVGAVVGGPDCEDKFSDDRGNYMQTEACTYNTAPLVGVFAKLSSLEHRIQVEPETTRSYMLHTTN 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8753914 8756572 - Carg15716-RA Car19g00816 167783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00816 545 MobiDBLite consensus disorder prediction 1 23 - -
Car19g00816 545 Pfam Glycosyl hydrolase family 9 49 518 IPR001701 GO:0004553|GO:0005975
Car19g00816 545 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 421 447 IPR018221 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00816 Car20g00551 CCT
Car19g00816 Car20g00551 ECH
Car11g01561 Car19g00816 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01152 Car-Chr15:9056868 Car19g00816 Car-Chr19:8753914 0 dispersed
Car16g00489 Car-Chr16:3127496 Car19g00816 Car-Chr19:8753914 0 dispersed
Car16g00881 Car-Chr16:6699733 Car19g00816 Car-Chr19:8753914 0 dispersed
Car17g00944 Car-Chr17:7698774 Car19g00816 Car-Chr19:8753914 0 dispersed
Car19g00816 Car-Chr19:8753914 Car16g01161 Car-Chr16:9911990 2.13E-146 dispersed
Car11g01613 Car-Chr11:12803985 Car19g00816 Car-Chr19:8753914 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00816 - - cmax:111468388 1042.34