Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00829 ATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCATTATCATAAATACGAAGAAGGTGAAGTCTGTGGGATTTGTGGCCATCGGGTTCCCGCTACATCGGAGAAAACTTCGTTGCAATTTGCCGCGTTTCCTTCAGAGATTTTGCCGGAGTTTCTTTATCTGGGAAGCTATGATAACGCTTCCCGCTCTGAACTTTTGAAGACTCAAGGAATCTCCCGCGTTCTGAATACTGTGCCTGATTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATATGATAAGACTTTACCTTTTGATGATGCAGTTGAATTCCTAGAGCAATGTGAAAGGGACAAGGCTCGTGTTCTGGTGCACTGCATGTCAGGAAAAAACAGGTCTCCAGCTATTGTAATAGCGTTCTTGATGAAATGCAAAGGTTGGAGACTTGCTCAGAGTTATCAGTGGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATCATCCCAAAACACCCTTCCAGTCTTCCCTCCTGTTGGTCTGCCTTCTTTTGGCTTCAACTTCCCAAAGACCAGCGACCCAGTTCCTACAACACCATTCAACACCATTGCTGCAACTTCGATCTTTACCCGCCCAACCGTAGATGTACCGTCCCACGAGTTTACATTCGGTGCTGGGCAGACTCAAAACAGTTTCGCCGCTAATCCACAGATCAACCAGCAGCCACATCCAAATGGGTAA 735 46.39 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQFAAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPDCQNLYKNSFTYHCLQYDKTLPFDDAVEFLEQCERDKARVLVHCMSGKNRSPAIVIAFLMKCKGWRLAQSYQWLQEYEQKVFGSSQNTLPVFPPVGLPSFGFNFPKTSDPVPTTPFNTIAATSIFTRPTVDVPSHEFTFGAGQTQNSFAANPQINQQPHPNG 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8814792 8818126 - Carg15703-RA Car19g00829 167796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00829 244 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Car19g00829 244 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 185 IPR020422 GO:0006470|GO:0008138
Car19g00829 244 Pfam Dual specificity phosphatase, catalytic domain 55 163 IPR000340 GO:0008138|GO:0016311
Car19g00829 244 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00686 Car-Chr18:8145204 Car19g00829 Car-Chr19:8814792 4.29E-10 dispersed
Car19g00829 Car-Chr19:8814792 Car08g01045 Car-Chr8:7135371 2.25E-07 dispersed
Car11g01624 Car-Chr11:12864460 Car19g00829 Car-Chr19:8814792 2.71E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00829 K04459 - csv:101211000 442.195