Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00847 TGGTGGTGCCGGTTGTTCCGGTTTGGTGATTGGGTTTCTGGGATTGCAGGTGGGGAAGTGTATGAGGGATTTGATTTGGATTTCGTGTTCATTGTTCTTCAAGCTGGGTTTGAGACTTTGGGGAAATGCAGACCGATCACCAATTCTGCAGAATTGGACTTTTTCTCTGAATATGGAGATGCCAACAGATTCAAAATCCAGGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACATGATATTTTTGAACATGTATCTGATGCTGCTCGGATTCTTCGTGAGATAAAGCTACTCAGACTTCTACGACATCCCGATATTGTCGAAATCAAACACATTATGTTACCACCTTCTCGCAGGGGTTTCAAAGATATTTTTGTTGTGTTCGAGTTGATGGAATCAGATTTACATCAAGTCATCAAGGCCAATGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTACCAGCTACTCCGTGCACTGAAATATATTCACACAGCAAATGTTTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAGTTTGTGATTTTGGATTGGCTAGAGTTGCTTTCAGCGACACCCCGACAACAATATTTTGGACGGACTATGTTGCTACCAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGATGAAGTACTGACCGGAAAACCACTTTTTCCTGGTAAAAATATTGTTCACCAACTTGATTTGATGACAGATCTCCTTGGAACGCCTTCGTTAGATACCATTTCTCGGGCAAGTTGCATTTTATTATGTGTAAGAAATGAAAAGGCTAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCACAGAAGTTCCCAAATGTGGATCCTCTAGCCCTGCAATTACTACGACGATTGCTTGCATTTGATCCAAAGGATCGACCTACTGCCGAAGAGGCATTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCTAAGGTGGAGTTTGAGTTCGAGAGGAGAAAGGTCACGAAAGACGACATTCGCGAGCTGATATTCCTCGAGATACTAGAATACCATCCTCAACTGCTGAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTTGATCAGTTCAAAAGGCAATTTGCTCATCTTGAAGATAATGGTGGGAAAAGTGGACCAGCTTATCCTCTTGAAAGAAAGCATGCATCTCTTCCTAGGTCTTCAGTACAATCAAATACCATTCCTCCTAAGCCAACATCAAATATTGTTTCCTTTAAAGACCGATGTGCACCAGCAGCCTCATTCAGCAGCCAGAGGATTGCTGCTACTCAAGCCAAGCCTGGAAGAATTTCGGGCCCGGTCATGCCATACGATAGCGGTGGAAGTGTCGTTAAAGATGCTTACGACCCAAGAATGCTAATTAGAAGTGCCCTCCCTTCTCATGCTATCCATCCCACATATTATTACCAACAATCTTGCGGCCAAAATGAAGGAAGATCAGCATCAGGGGCTGAGCAGGACACTTCCTTGCGATGTAAACAATCCCCTCAATGTGGAATGGCTGCCAAGTTAGCAGCAGATACAGCTGCTACTGGTGCTTTCTCAAATCCTTTCTTTATGGCGCGAGTAGGCATCCCCAAGGTGGGAAACAATGACCGTGCTGCTGCACGTTTGCAGGTAAATGCTCAATATGATGCTGGAGCCATTGCTGCCACCACCCGAAGAAACATGGGTGCAGTCGAGTATGGTATGGCAAGAATGTATTAG 1929 43.13 WWCRLFRFGDWVSGIAGGEVYEGFDLDFVFIVLQAGFETLGKCRPITNSAELDFFSEYGDANRFKIQEVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFDEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRASCILLCVRNEKARRYLTSMRKKQPIPFSQKFPNVDPLALQLLRRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFLEILEYHPQLLKDYLNGTERSNFLYPSALDQFKRQFAHLEDNGGKSGPAYPLERKHASLPRSSVQSNTIPPKPTSNIVSFKDRCAPAASFSSQRIAATQAKPGRISGPVMPYDSGGSVVKDAYDPRMLIRSALPSHAIHPTYYYQQSCGQNEGRSASGAEQDTSLRCKQSPQCGMAAKLAADTAATGAFSNPFFMARVGIPKVGNNDRAAARLQVNAQYDAGAIAATTRRNMGAVEYGMARMY 642
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 8898907 8903665 - Carg15684-RA Car19g00847 167814
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car19g00847 642 ProSitePatterns Protein kinases ATP-binding region signature. 70 94 IPR017441 GO:0005524
Car19g00847 642 Pfam Protein kinase domain 65 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00847 642 ProSiteProfiles Protein kinase domain profile. 64 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car19g00847 642 ProSitePatterns MAP kinase signature. 99 202 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car19g00847 642 MobiDBLite consensus disorder prediction 442 477 - -
Car19g00847 642 MobiDBLite consensus disorder prediction 458 474 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00405 Car-Chr16:2507627 Car19g00847 Car-Chr19:8898907 0 dispersed
Car17g00253 Car-Chr17:1566217 Car19g00847 Car-Chr19:8898907 0 dispersed
Car11g01641 Car-Chr11:12935511 Car19g00847 Car-Chr19:8898907 0 wgd
Car19g00847 Car-Chr19:8898907 Car02g00030 Car-Chr2:250886 1.23E-153 wgd
Car19g00847 Car-Chr19:8898907 Car20g00224 Car-Chr20:1293519 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89578 PF00069 Pkinase 6.30E-65 CL0016 Car PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00847 - - csv:101214068 1063.14