Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car19g00856 | ATGTCAAATGAAGAAGGGAAGAATCTATACCAGCCGTATGATCCATTCCATTACAACCAACTGGATATGAACCGTTCGATCTTCCATCAGCAGCACCCGCCGTTGGATCCTGCTTTGATGAGCTTCACTAACTTCTTCGACACCTCGTTGGACTACAACAGCCTGTCGCGAGCGTTCGACGTGTCGTGTTCTTCATCTGAAGTCATTTCTCCGGTGGACGACGTGTCGAAAAACAAGGCTTCTTGTGGAGCCAAGAATTTGAACCAATCTTCAACCACCCAGAATTCTTCTGTGTCGTCTTCGTCTAATGAGGCCGTAGTTGAAGAAGATTCAATCAAGAGCATCAAAGAGGACCCAAAACATGAAGAAAAGTCCAAGAAACAGAACAACATATCAAAAAAGAAAGAGAAGAGGCAGAGGGAGCCACGGTTTGCTTTCTTGACAAAGAGTGAGATAGATCACCTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAGGCAGTAAAAAACAGTCCTTACCCAAGAAGCTACTATAGATGCACGAGTCAGAAGTGTTTAGTGAAGAAGCGAGTGGAAAGATCATATCAAGATCCATCTGTGGTGATTACTACATATGAAGGTCAACACAACCACCATTGCCCAGCTACCCTCCGAGGCCATTCTGCTGGAATCATGTCGTCTCCGTTTTATGCATCGGCGGCGTCGACGTCGCTCACCGCCCCCTCATCTGGTCCTACGCTTCCTCATGAACTCTTTTCGCATTTGTTACCGACCAACTCCCGAGCTGACCCGGCATCCGTGATGTACCAGAATCTAAGCCTTCAAATGCCTGATCATTATGGTTTGTTACAAGATTTGTTCACTCAAAAATAG | 876 | 45.43 | MSNEEGKNLYQPYDPFHYNQLDMNRSIFHQQHPPLDPALMSFTNFFDTSLDYNSLSRAFDVSCSSSEVISPVDDVSKNKASCGAKNLNQSSTTQNSSVSSSSNEAVVEEDSIKSIKEDPKHEEKSKKQNNISKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCLVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYASAASTSLTAPSSGPTLPHELFSHLLPTNSRADPASVMYQNLSLQMPDHYGLLQDLFTQK | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 8938314 | 8939445 | + | Carg15675-RA | Car19g00856 | 167823 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car19g00856 | 291 | MobiDBLite | consensus disorder prediction | 84 | 108 | - | - | |
Car19g00856 | 291 | MobiDBLite | consensus disorder prediction | 84 | 145 | - | - | |
Car19g00856 | 291 | Pfam | WRKY DNA -binding domain | 156 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car19g00856 | 291 | MobiDBLite | consensus disorder prediction | 109 | 145 | - | - | |
Car19g00856 | 291 | ProSiteProfiles | WRKY domain profile. | 150 | 215 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car19g00856 | Car20g00226 | CCT | |
Car19g00856 | Car20g00226 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car03g01238 | Car-Chr3:9577419 | Car19g00856 | Car-Chr19:8938314 | 3.10E-57 | dispersed | |
Car06g01335 | Car-Chr6:9575672 | Car19g00856 | Car-Chr19:8938314 | 2.00E-45 | dispersed | |
Car07g00110 | Car-Chr7:709532 | Car19g00856 | Car-Chr19:8938314 | 3.68E-52 | dispersed | |
Car17g00350 | Car-Chr17:2214403 | Car19g00856 | Car-Chr19:8938314 | 3.45E-49 | dispersed | |
Car11g01645 | Car-Chr11:12951829 | Car19g00856 | Car-Chr19:8938314 | 3.32E-134 | wgd | |
Car19g00856 | Car-Chr19:8938314 | Car20g00226 | Car-Chr20:1304429 | 2.95E-61 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5310 | PF03106 | WRKY | 2.40E-25 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car19g00856 | - | - | csv:101211248 | 424.091 |