Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00856 ATGTCAAATGAAGAAGGGAAGAATCTATACCAGCCGTATGATCCATTCCATTACAACCAACTGGATATGAACCGTTCGATCTTCCATCAGCAGCACCCGCCGTTGGATCCTGCTTTGATGAGCTTCACTAACTTCTTCGACACCTCGTTGGACTACAACAGCCTGTCGCGAGCGTTCGACGTGTCGTGTTCTTCATCTGAAGTCATTTCTCCGGTGGACGACGTGTCGAAAAACAAGGCTTCTTGTGGAGCCAAGAATTTGAACCAATCTTCAACCACCCAGAATTCTTCTGTGTCGTCTTCGTCTAATGAGGCCGTAGTTGAAGAAGATTCAATCAAGAGCATCAAAGAGGACCCAAAACATGAAGAAAAGTCCAAGAAACAGAACAACATATCAAAAAAGAAAGAGAAGAGGCAGAGGGAGCCACGGTTTGCTTTCTTGACAAAGAGTGAGATAGATCACCTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAGGCAGTAAAAAACAGTCCTTACCCAAGAAGCTACTATAGATGCACGAGTCAGAAGTGTTTAGTGAAGAAGCGAGTGGAAAGATCATATCAAGATCCATCTGTGGTGATTACTACATATGAAGGTCAACACAACCACCATTGCCCAGCTACCCTCCGAGGCCATTCTGCTGGAATCATGTCGTCTCCGTTTTATGCATCGGCGGCGTCGACGTCGCTCACCGCCCCCTCATCTGGTCCTACGCTTCCTCATGAACTCTTTTCGCATTTGTTACCGACCAACTCCCGAGCTGACCCGGCATCCGTGATGTACCAGAATCTAAGCCTTCAAATGCCTGATCATTATGGTTTGTTACAAGATTTGTTCACTCAAAAATAG 876 45.43 MSNEEGKNLYQPYDPFHYNQLDMNRSIFHQQHPPLDPALMSFTNFFDTSLDYNSLSRAFDVSCSSSEVISPVDDVSKNKASCGAKNLNQSSTTQNSSVSSSSNEAVVEEDSIKSIKEDPKHEEKSKKQNNISKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCLVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYASAASTSLTAPSSGPTLPHELFSHLLPTNSRADPASVMYQNLSLQMPDHYGLLQDLFTQK 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8938314 8939445 + Carg15675-RA Car19g00856 167823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00856 291 MobiDBLite consensus disorder prediction 84 108 - -
Car19g00856 291 MobiDBLite consensus disorder prediction 84 145 - -
Car19g00856 291 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car19g00856 291 MobiDBLite consensus disorder prediction 109 145 - -
Car19g00856 291 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00856 Car20g00226 CCT
Car19g00856 Car20g00226 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01238 Car-Chr3:9577419 Car19g00856 Car-Chr19:8938314 3.10E-57 dispersed
Car06g01335 Car-Chr6:9575672 Car19g00856 Car-Chr19:8938314 2.00E-45 dispersed
Car07g00110 Car-Chr7:709532 Car19g00856 Car-Chr19:8938314 3.68E-52 dispersed
Car17g00350 Car-Chr17:2214403 Car19g00856 Car-Chr19:8938314 3.45E-49 dispersed
Car11g01645 Car-Chr11:12951829 Car19g00856 Car-Chr19:8938314 3.32E-134 wgd
Car19g00856 Car-Chr19:8938314 Car20g00226 Car-Chr20:1304429 2.95E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5310 PF03106 WRKY 2.40E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00856 - - csv:101211248 424.091