Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00858 GTCGATATTGGACTATCTATGCTTGTTGGGTCCCAGTTGGTTAAAATAGAAGCCCTTTCTCTGCTTCTGTGGGATCTTAAAGAGGAAGATCAAGGGGGGGTCCGAGCCAGTTCGAAGTTTTGGCATCTTGAGGATCAACCATCAGCTATGTCATCTGGAACTACTTTGAATACAGAATTGTCAAAGAAAACGTCCTTCCTTGGTTTGTCCCTATGGGTTTTGATCTGCTTATGTGTTGGTGCATTTATTGTTTTGATTCTTGGTATCTTATCTGTATGGGTGATGTTTCAAAGAAAAACAAGGAGATCCCCAGAAAACTTCTCTACTTCTCAAATACCAAACGTCTCGAAGGATATTAAGGTGGACAGAATCGCGACTCAATCTGCCCATGGCAATCATCTTGAGAACCTTTATCATTCTATTCATGATAAATCAAATGAGAAGAACTCAGAGAAGATGATTGGACATTTGAGCATGAGCAAGTCGAGTGATCCTGATAACATAAGCCAATGCAGCTCCAATTACTATCATGAAAGGGTTTTTAGCTCACATTCAGGAGAAGAAGGAAGCTCTGGGACTGTTAGAAAGCAGTCTTCCATGTCGTATGGAGGATATGGAGGACTTGTGACTGCCTCTCCTCTCGTTGGCTTACCTGAAATTTCACATCTTGGTTGGGGTCATTGGTTTACCCTCAGGGACCTAGAATTTGCGACACATCGTTTCTCTCCAGACAATGTTCTTGGTGAAGGGGGTTATGGGGTTGTCTATAAAGGCAGACTGATAAATGGAACTGAGGTTGCAGTAAAGAAGCTTCTCAATAATCTGGGACAAGCAGAGAAAGAATTTAGAGTTGAGGTGGAGGCCATTGGTCATGTAAGACACAAGAACCTCGTACGACTCCTCGGCTATTGCATTGAAGGAGTTCATAGGATGCTGGTCTATGAATATGTGAACAATGGCAACTTAGAACAATGGTTACATGGCGCTATGCGGCAACATGGCACCCTTACATGGGATGCCCGGATGAAGGTGCTTCTTGGCACTGCTAAGGCGTAA 1056 43.37 VDIGLSMLVGSQLVKIEALSLLLWDLKEEDQGGVRASSKFWHLEDQPSAMSSGTTLNTELSKKTSFLGLSLWVLICLCVGAFIVLILGILSVWVMFQRKTRRSPENFSTSQIPNVSKDIKVDRIATQSAHGNHLENLYHSIHDKSNEKNSEKMIGHLSMSKSSDPDNISQCSSNYYHERVFSSHSGEEGSSGTVRKQSSMSYGGYGGLVTASPLVGLPEISHLGWGHWFTLRDLEFATHRFSPDNVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWDARMKVLLGTAKA 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8944370 8946197 - Carg15673-RA Car19g00858 167825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00858 351 ProSitePatterns Protein kinases ATP-binding region signature. 247 270 IPR017441 GO:0005524
Car19g00858 351 Pfam Protein tyrosine and serine/threonine kinase 245 345 IPR001245 GO:0004672|GO:0006468
Car19g00858 351 Coils Coil 261 281 - -
Car19g00858 351 ProSiteProfiles Protein kinase domain profile. 241 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00858 Car20g00227 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00858 Car-Chr19:8944370 Car20g00227 Car-Chr20:1307189 1.53E-164 dispersed
Car19g00858 Car-Chr19:8944370 Car11g01646 Car-Chr11:12954273 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89580 PF07714 PK_Tyr_Ser-Thr 6.10E-17 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00858 - - csv:101212378 577.015