Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car20g00007 | ATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTTGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTGCTTGGACCCTGATAACTTCAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGGACGTTTCAAGTATGAAGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCGATGTTCCAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGTGTCTAGGTTCCCCTCCCGCTTTTCTGTCTACTATGTGCTCGATCAGCCTCCTGAAGGATGGGATGGCGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCAAATGTTCGGGTGGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAATCCAACCAACCCCATTATTTACTCTCCTCTTTGCCGATCTAATTCAATCTTCCCATCCCCATCCCAAAAGCAATTGA | 930 | 46.67 | MATSFVHSHRPEFLTVAVAAVAIGVATAYYFYITKKSKPQGCLDPDNFKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHMSCRGKDSEGEEVVKPYTPTSLDTDVGYFDLVIKMYPQGRMSHHFREMREGDFLAVKGPKGRFKYEANEVEAFGMLAGGTGITPMFQVARAILENPVDHTNVHLIYANATYEDILLKEELDSLVSRFPSRFSVYYVLDQPPEGWDGGVGFVTEEMIRLHCPGPSPNVRVDIEVRTTPHEQSYGCLPQNYWLYFPNAVPVLIQPTPLFTLLFADLIQSSHPHPKSN | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 34752 | 38067 | + | Carg06964-RA | Car20g00007 | 167866 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car20g00007 | 309 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 46 | 150 | IPR017927 | GO:0016491 | |
| Car20g00007 | 309 | Pfam | Oxidoreductase NAD-binding domain | 159 | 246 | IPR001433 | GO:0016491 | |
| Car20g00007 | 309 | Pfam | Oxidoreductase FAD-binding domain | 51 | 149 | IPR008333 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car06g00039 | Car-Chr6:295623 | Car20g00007 | Car-Chr20:34752 | 1.17E-124 | dispersed | |
| Car12g01193 | Car-Chr12:11362968 | Car20g00007 | Car-Chr20:34752 | 5.39E-49 | dispersed | |
| Car15g00656 | Car-Chr15:3634989 | Car20g00007 | Car-Chr20:34752 | 1.96E-37 | dispersed | |
| Car15g00657 | Car-Chr15:3648196 | Car20g00007 | Car-Chr20:34752 | 8.45E-41 | dispersed | |
| Car20g00007 | Car-Chr20:34752 | Car07g01094 | Car-Chr7:6507820 | 1.09E-135 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car20g00007 | K00326 | - | csv:101219272 | 449.899 |