Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00038 ATGGCTTCCCCTAAACTCGCACCCTTCCTTGTTGTGGCGGCTCTGATGCTACGAGCTTCTCACGCCCACCTTAGCCCTTTCTTCCACGCCAAAACATGCCCTCAGCTGCCTTTCGTTGTTCTCAACGTGGTTGCCCAAGCTCTACAAACTGACGACCGAGCAGCTGCCAAGCTCATTCGCCTCCATTTTCATGATTGCTTCGTCAATGGGTGTGATGGGTCTGTGCTATTGGAGGACGTGCCGGGCGTCATCGATAGCGAATTAAACGGACCACCAAACGGTGGGATCCAAGGGCTGGACATCGTGGACAACATTAAATCAGCGGTTGAAAGCGCTTGCCCAGGCGTTGTTTCCTGCGCCGATATCTTAGCCATTTCCTCACAAATCTCTGTTTTCTTGTCGGGAGGCCCAATTTGGGAAGTTCCACTGGGAAGAAAAGACAGCAGGATAGCCAATAGAACCGGAACCTCAAACCTTCCTGGTCCCTCCGAAACCCTAGTCGGGCTTAAACGCAAGTTTGCGGCACAGGGGCTTGATTCTACGGATCTTGTGGCTCTATCAGGAGCACACACGTTCGGGCGAGCGAGATGTTTTTTCTTCACTGGCCGCTTCGACAACTTCAACAACACCGGAAGACCCGACCCAACGCTAAACCCTGTTTACAGGGAGCAGCTTCGACGACTCTGTACGACCCAACAAACACGAGTCAATTTCGACCCCATAACGCCAACCAGATTCGACAGAGCCTACTATACCAATCTCATAAACCTGAAGGGGCTTCTCCAAAGTGACCAAGAGCTGTTCTCCACCCCCAGGGCTGATACCACGGCCATCGTAAACGATTTCGCCGCTAACGAGCTTGCCTTCTTTACCCAATTTGTGAAATCCATGATCAAAATGGGGAATCTGAAGCCGCCCCCCGGCATCAGATCAGAAATCAGACAAAACTGTAGGAGGGTCAACCCGGGCTGCGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATCGACAGTGAACTCAACGGACTAGGAAATTTAGGAATCCAAGGACTCGAGATTGTCGACGCCATCAAAGCCGCCGTTGAAAGCGAATGTCCCGGCGTCGTATCTTGCGCCGATGTCCTAGCTCTGGCCGCTAAACAATCTGTGGACGTGCAAGGTGGGCCCAGCTGGAGAGTTTTATTCGGAAGAAGAGATAGCAGAACAGCCAATAGAACAGGGGCCGACGAACTCCCAAGTCCGTTCGAAACTCTTGAGCCACTCAAAAAGAAGTTCGAAGCCCTTGGGCTGGATTCCACCGATCTTGTTGCTCTATCTGGGGCGCATACGTTCGGTCGGTCGAGATGCATGTTCTTCAGCGGGCGTTTCTCCAACTTCAATGGGACTGGGCAGCCAGATCCGACACTGGACCCAACCTACAGGCAGGAGCTGGAGAGAGGTTGTATAGATGGAGAGACGCGAGTGAATTTCGATCCAACCACACCGGACACATTTGACAAAAACTACTACACCAACCTTCAAGCCAATCGAGGGCTGCTAACGAGTGACCAAGTGCTGTTCTCCACTCCTGGCGCCGACACAATTGAAATTGTGAACCGTCTTGGGTCCCGAGAAGGAACCTTCTTTAGACAATTTCGGCTGTCCATGATAAAGATGGGAAACATTAGGCCCTTAACTGGAAACCAAGGGGAAATCAGAAGAAACTGCAGGAGGGTGAATGAGTTGGGAGGTGAAGCAGGGCATGATGTTCTGGATATAATATTTTCCATTTCTGGAGGGAACATGTGTGCCTCCTCCGCTCAACTCTCCGAAACCTTTTACGACCGAACTTGCCCTCGCCTCCCCAACATTGTCCGCGCCGCCGTCAAGAAAGCAATCGAAACCGACATCCGTGCCGGTGCAAAGCTCATCCGCCTCCATTTCCACGATTGCTTCGTCAATGGCTGTGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATAGTCAGTGAGCTGAACTCCCCCGGAAATCAGGGAATTCAAGGACTCGAGATTGTCGACGCCATTAAAGCCGCCGTGGAGAGTGAATGCCCCAATACCGTTTCCTGTGCCGACATCCTAGCTCAGGCTTCTAAGGATTCTGTCGATGTGCAAGGAGGACCTAGTTGGAGAGTGTTATACGGAAGACGAGACAGTAGAATAGCGAACAAAACAGGGGCTGATAGTGGCCTGGCCAGTCCCTTCGAAACTCTCGACCAACTCAAAAAGAAATTTTCTGATGTTGACCTCGGAACCACTGATCTCGTGGCTTTATCTGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGCCACCGATTTGCCAATTTCAACAATACCGGAAGGCCAGATCCATCACTGGACGCTAACTACAGAGGATTCCTTCAAGGGGTTTGTTCTGCAGGTCCAGACACAAGAGCAAATTTCGACCCGACAACACCGGACGTGTTCGACAAAAACTACTACACCAACCTTCAAGCCGGGAAGGGGCTTCTGCAGAGCGATCAAGAGCTGTTCTCCACTGCTGGGGCGGACACCATCGCCATTGTGAACAGCTTCGCGGCCAGAGAAGGCACCTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGCAACATCAAGCCTTTGACTGGCAGCCGTGGGGAAATCAGAAGAAACTGCAGGAGGGTCAACTCCGCCACGGGTGGAGAAGGCCACGATAGAAAAAGAATGGTTTCCTTCAAAGTTGCTTTCTTTTTGTTTGTGGGGTTCATGGTCGGAGCTTCTAAAGCTCAGCTGTGCCCGACGTTCTATGACGACTCATGCCCCGACGTATCGGACATTGTGCGCGGTGTGGTGCAGCAGGCTTTGGAGACTGACGACCGAGCGGGTGCCAGACTCATTCGCCTTCACTTCCATGACTGTTTCGTTGATGGGTGTGATGGATCAGTTTTACTAGTGAACCAAACGGGAGTAGTGAGTGAGCTTGGCGCTCCTGGAAATGCAAATATTACAGGATTTAACATTGTTGATGACATCAAAGCTGCCCTCGAGGAGGCTTGTCCGGGTGTTGTTTCTTGTGCCGACATCTTAGCCTTAGCTTCCGTACATGCGGTGGGAGGTCCCTTTTGGGAGGTTCAACTGGGAAGAAGAGACAGGCGAAGGGCCAACTTACAAGGCGCAATCAACGGGCTTCCAAGTCCCTTCGAAAATGTTAAAGAACTTAAAGAAAAGTTCGGCAGAGTGGGTCTTGATTCTACTGATCTTGTTGCTCTATCTGGGGCCCACACATTCGGGCGTTCGAGATGCCGATTCTTCGACAGACGTTTGAACGTTTCGAGCCCAGACAACACCCTGGACGCCTCATATGCAACCCAGCTCCGTCAAGCTTGCGCTAGCAGCAGAGACACGTTCTTGAACCTCGACCCCACCACTCCCGACGACTTCGACAACAACTACTACACCAACCTTCAGTCCAACTTCGGCCTTCTCGGCAGCGACCAGGTCCTGTTCTCCACTCCCGGCGAGGACACCGTGGACATCGTCAACATGTTCGCCGGCAGCGAGCAGCAGTTCTTCGACAGCTTCGGGCAGTCCATGATCAACATGGGAAATATCAGCCCTTTAACTGGTGACCAGGGAGAAGGATGTGATGGGTCGGTGCTATTAGAAGATCAAGATGGCATAGTGAGCGAGTTGGGTGCAAATGGAAACGCTGGCATCACAGGTTTCAATATTGTTAATGACATCAAAGCTGCAATCGAGAATGTTTGTCCGGGTGTCGTCTCTTGTGCTGATATACTAGCCCTTGCTTCTCGACACTCCGTCAACTTGGCAGGAGGCCCGGGTTGGGAGGTTCAATTAGGAAGAAGAGATGGAAGAACAGCAAATTTGGATGGTGCCATGGAGCTTCCAAGTCCTTTTGACGATCTCTCAGTCCTTAGAAGAAAGCGGCTAAACACTTCAAACCCGGACACAACCCTGAACTCGACGTACGCGGACGAGCTGCGCCAAAACTGTCAACCAGGGCGAGACACATTCGTGAATCTGGACCCAACCACACCGGACACCTTCGACAGCAACTACTTCACAAATCTTCAAAGCAATCGCGGGCTTCTGGAAAGTGACCAAGTTCTGTTCTCCACCAGCGGAGCTCCAACTATCAGTATTGTCAACAGCTTCGCCAGCAGCCAGAGCCAATTCTTCACCGCCTTCGCTCAGTCAATGATTAACATGGGAAATCTCGGGCCTTTGACTGGGAGCACAGGAGAAATCAGGACCAATTGCAGAAGACTCAACTAA 4308 51.74 MASPKLAPFLVVAALMLRASHAHLSPFFHAKTCPQLPFVVLNVVAQALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNGPPNGGIQGLDIVDNIKSAVESACPGVVSCADILAISSQISVFLSGGPIWEVPLGRKDSRIANRTGTSNLPGPSETLVGLKRKFAAQGLDSTDLVALSGAHTFGRARCFFFTGRFDNFNNTGRPDPTLNPVYREQLRRLCTTQQTRVNFDPITPTRFDRAYYTNLINLKGLLQSDQELFSTPRADTTAIVNDFAANELAFFTQFVKSMIKMGNLKPPPGIRSEIRQNCRRVNPGCDGSVLLEDAPGIDSELNGLGNLGIQGLEIVDAIKAAVESECPGVVSCADVLALAAKQSVDVQGGPSWRVLFGRRDSRTANRTGADELPSPFETLEPLKKKFEALGLDSTDLVALSGAHTFGRSRCMFFSGRFSNFNGTGQPDPTLDPTYRQELERGCIDGETRVNFDPTTPDTFDKNYYTNLQANRGLLTSDQVLFSTPGADTIEIVNRLGSREGTFFRQFRLSMIKMGNIRPLTGNQGEIRRNCRRVNELGGEAGHDVLDIIFSISGGNMCASSAQLSETFYDRTCPRLPNIVRAAVKKAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKAAVESECPNTVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDQLKKKFSDVDLGTTDLVALSGAHTFGRSRCRFFSHRFANFNNTGRPDPSLDANYRGFLQGVCSAGPDTRANFDPTTPDVFDKNYYTNLQAGKGLLQSDQELFSTAGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGSRGEIRRNCRRVNSATGGEGHDRKRMVSFKVAFFLFVGFMVGASKAQLCPTFYDDSCPDVSDIVRGVVQQALETDDRAGARLIRLHFHDCFVDGCDGSVLLVNQTGVVSELGAPGNANITGFNIVDDIKAALEEACPGVVSCADILALASVHAVGGPFWEVQLGRRDRRRANLQGAINGLPSPFENVKELKEKFGRVGLDSTDLVALSGAHTFGRSRCRFFDRRLNVSSPDNTLDASYATQLRQACASSRDTFLNLDPTTPDDFDNNYYTNLQSNFGLLGSDQVLFSTPGEDTVDIVNMFAGSEQQFFDSFGQSMINMGNISPLTGDQGEGCDGSVLLEDQDGIVSELGANGNAGITGFNIVNDIKAAIENVCPGVVSCADILALASRHSVNLAGGPGWEVQLGRRDGRTANLDGAMELPSPFDDLSVLRRKRLNTSNPDTTLNSTYADELRQNCQPGRDTFVNLDPTTPDTFDSNYFTNLQSNRGLLESDQVLFSTSGAPTISIVNSFASSQSQFFTAFAQSMINMGNLGPLTGSTGEIRTNCRRLN 1435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 206365 222850 - Carg06933-RA Car20g00038 167897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00038 1435 ProSiteProfiles Plant heme peroxidase family profile. 601 900 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Car20g00038 1435 Pfam Peroxidase 1212 1319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 Pfam Peroxidase 322 533 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 Pfam Peroxidase 1320 1398 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 Pfam Peroxidase 618 863 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 Pfam Peroxidase 951 1189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 ProSiteProfiles Plant heme peroxidase family profile. 323 573 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 ProSitePatterns Peroxidases active site signature. 966 977 IPR019794 GO:0004601
Car20g00038 1435 ProSitePatterns Peroxidases proximal heme-ligand signature. 760 770 IPR019793 -
Car20g00038 1435 ProSitePatterns Peroxidases proximal heme-ligand signature. 434 444 IPR019793 -
Car20g00038 1435 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 ProSitePatterns Peroxidases active site signature. 633 644 IPR019794 GO:0004601
Car20g00038 1435 ProSitePatterns Peroxidases proximal heme-ligand signature. 1090 1100 IPR019793 -
Car20g00038 1435 ProSiteProfiles Plant heme peroxidase family profile. 934 1435 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00038 1435 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01524 Car-Chr11:12264702 Car20g00038 Car-Chr20:206365 4.92E-32 dispersed
Car15g01232 Car-Chr15:9586867 Car20g00038 Car-Chr20:206365 1.72E-71 dispersed
Car17g00954 Car-Chr17:7753325 Car20g00038 Car-Chr20:206365 1.32E-39 dispersed
Car20g00038 Car-Chr20:206365 Car16g00669 Car-Chr16:4236763 8.09E-49 dispersed
Car20g00038 Car-Chr20:206365 Car20g00040 Car-Chr20:229794 7.19E-07 proximal
Car02g01006 Car-Chr2:7084113 Car20g00038 Car-Chr20:206365 1.05E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00038 - K00430 peu:105126277 635.18