Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00057 ATGGATTTGGATCACCCATCCGCGCCACACCTCGATCTTCACAGTCTCGGGGCCCTCAGGGTACTCGGAAAAGGAGCCATGGGGACCGTCTTCCTCGTCCACCACCGCCTTGCCGATGACCCTGCTCATTTCCCCTTTGCTCTCAAGGTCGTCGACAAATCCTCTTTTGTCTCCAAGCTCGACGCGGAGCGCAGAGCCCGTTGGGAGATTCAGGTTCTTTCTCGTTTGTCCTTCCCTAAACCCCACCCCTTCCTCCCCCACATTATCGGTTCCTTCGAGTCCGACGAATTTTTGGGCTGGGCCCTTCCCTACTGTCCTGGCGGCGACCTTAACGTCTTGCGTCACCGTCAAATGGACCGGGTTTTCTCGCCCGCCGTCATCAGGTTCTATTTGGCCGAGATAGTCTGTGCCCTCGAACACCTCCATAGCCTGGGCATCGTCTACCGAGATTTGAAGCCGGAGAATGTATTGATTCAACAATCCGGTCACGTCACTCTCACGGACTTCGATTTGTCGCGTAATTTGACTCGCAGAACAGTAAATGACGTCGTCTCGCTTGATAACTCCGGCCACGAGAAACCGACGGTGGTCGTCCGGCCAAAAAACCGGCGGAAATTGACGCGATGGTTTATGGCGACCTCCAATGCTCGAGACGGGTCAAGAAAGGCTAAATTGGCTCGGGTTAGCCCTGTGAGCCGCCGGAAGCCGAGTTTCTCCAACGGCGAGCGGTCGAACTCGTTTGTCGGAACAGAGGAGTATATTTCGCCGGAGGTCGTTCGAGGCGAGGGACATGAATTCGCCGTCGACTGGTGGGCCCTGGGGATTCTCACGTACGAGATGCTCTACGGGACGACGCCGTTTAAGGGGAAGAACCGGAAAGAGACGTTTGGAAACGTTCTGTTGAAAGCTCCGGAGTTGATCGGAAAGCGTTCGGATTTAACGGATTTAATCGAACGGTTGCTAGTGAAGGACCCCACCAGGCGGTTAGGGTACGTACGCGGCGCATGTGAGATCAAAGAGCATGCGTTTTTTAACGGCGTGAAGTGGGACCTATTAACGGAGGTCATGCGTCCCCCATTTTTACCCCCTGACGAAGAAACGGAGTTGACGAAGAATCCAGCGCTCGGTGGTGTGGGTATAACGGAATACTTCCATAGACAGAGATCCCCGGCTTCGTTTCCACCATCGGCGTCGTCAACTCCGTCGACCTCCTTCAGTTGGGAGAATAACAAGAAGAAGTGTTTGACGGAGTTCTGA 1257 54.65 MDLDHPSAPHLDLHSLGALRVLGKGAMGTVFLVHHRLADDPAHFPFALKVVDKSSFVSKLDAERRARWEIQVLSRLSFPKPHPFLPHIIGSFESDEFLGWALPYCPGGDLNVLRHRQMDRVFSPAVIRFYLAEIVCALEHLHSLGIVYRDLKPENVLIQQSGHVTLTDFDLSRNLTRRTVNDVVSLDNSGHEKPTVVVRPKNRRKLTRWFMATSNARDGSRKAKLARVSPVSRRKPSFSNGERSNSFVGTEEYISPEVVRGEGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFGNVLLKAPELIGKRSDLTDLIERLLVKDPTRRLGYVRGACEIKEHAFFNGVKWDLLTEVMRPPFLPPDEETELTKNPALGGVGITEYFHRQRSPASFPPSASSTPSTSFSWENNKKKCLTEF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 317095 318351 - Carg06914-RA Car20g00057 167916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00057 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Car20g00057 418 Pfam Protein kinase domain 239 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00057 418 Pfam Protein kinase domain 20 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00057 418 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Car20g00057 418 MobiDBLite consensus disorder prediction 388 418 - -
Car20g00057 418 MobiDBLite consensus disorder prediction 391 411 - -
Car20g00057 418 ProSiteProfiles Protein kinase domain profile. 16 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01021 Car20g00057 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00057 Car-Chr20:317095 Car05g01224 Car-Chr5:11483433 8.92E-80 dispersed
Car08g00214 Car-Chr8:1327638 Car20g00057 Car-Chr20:317095 1.67E-97 transposed
Car02g01021 Car-Chr2:7176710 Car20g00057 Car-Chr20:317095 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89584 PF00069 Pkinase 4.10E-31 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00057 - K08286 csv:101207338 685.641