Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00091 ATGTGGTCCGCCGCAGCTGCTGCTCAGAGGTCTCTCAATTATGGCCTTGGATCGGAGATGGGAATGGTCGGGTTACGAGATGTGTATGTTGTCGCTCCGGCTGCCTCTTTTAATCCAAATCCTCACCATCACGACCCTAATCTCATCTCTGATGATCATTCACTTGCCGTCTCTAACTCCGCCACCGCCCTCGGTGTCGGAGTAGGCGTCGGTGTTATTCCGCTTCTCACTGCTGGCCCCTGCCTCGGCGTTGAGGAGGATAATCTCTTGGGTAGTCGGAGTGGTAGCAGAGGCGGAGGGATTCAGCTATGGCAGCAGAATCAGCAATCGACGCAACATTATTTGAAGAAAACGCCGTCGTCTTCTCTCGACCATCACCTCCATAATGCCTCCGGTACGAACGACCTTATCGGAGGAGGAATCGGCGTCTTTGGCGGTTTAGCTTCGTCGTCCTCGGCGACGACCACGTGCCAGGACTGTGGGAACCAAGCGAAGAAAGATTGTAGTCGTGGACGCTGCAGAACTTGTTGTCGAAGCCGAGGGTTCGATTGCGCGACTCATGTGAAGAGCACGTGGGTTCCTGCAGCCCGTCGGAGAGAGCGACAGCTCATGGCCATCACCGGAACCGCCGCAGACGGCTCTTCAGGTTCCGCCTCCGGCACAAAGAAACCGAGGCTTATAGCCTCGCAAACCACTTCTCACACTTCCACATCCAACACCACTCCTCCAGGAAGCATCGACACGAGCTCCAGTCATCAAGATGCAGGATTTAAAGAGGAATTACCAGGCCAAATACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTGACGGCGGTGGATGACGGCGAGGATGAGTACGCGTATCAAGCAGTCGTGAAGATCGGGGGCCATGTTTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCCGGAGATGGCTTCCCTAATGTATCGGAACTGAATTTGAGCGACGGTGGCGGTGGAGGCAGAAATAATCGGAATGGTTCTTCTTCTGCTCCGTTTGTCGATCCATCGGATGTTTACAACGCGGCCGCCTCCGGCAATGGTGGTGCTCCAGGTTTTCTCGGTGGTTCAAACTATGGTAATCAAATCCGCTGA 1119 54.33 MWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAVSNSATALGVGVGVGVIPLLTAGPCLGVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPSSSLDHHLHNASGTNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGVEAGDGFPNVSELNLSDGGGGGRNNRNGSSSAPFVDPSDVYNAAASGNGGAPGFLGGSNYGNQIR 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 496181 497934 + Carg06880-RA Car20g00091 167950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00091 372 MobiDBLite consensus disorder prediction 325 342 - -
Car20g00091 372 Pfam Domain of unknown function (DUF702) 154 309 - -
Car20g00091 372 MobiDBLite consensus disorder prediction 208 252 - -
Car20g00091 372 MobiDBLite consensus disorder prediction 319 342 - -
Car20g00091 372 MobiDBLite consensus disorder prediction 207 256 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01059 Car20g00091 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01406 Car-Chr4:8155536 Car20g00091 Car-Chr20:496181 4.37E-68 dispersed
Car11g00774 Car-Chr11:4517729 Car20g00091 Car-Chr20:496181 4.15E-36 dispersed
Car18g00790 Car-Chr18:8897594 Car20g00091 Car-Chr20:496181 1.30E-59 dispersed
Car19g00232 Car-Chr19:2337957 Car20g00091 Car-Chr20:496181 5.37E-39 dispersed
Car11g00770 Car-Chr11:4497832 Car20g00091 Car-Chr20:496181 1.10E-73 wgd
Car02g01059 Car-Chr2:7387158 Car20g00091 Car-Chr20:496181 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5326 PF05142 DUF702 1.40E-60 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00091 - - cmos:111448991 659.062