Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car20g00109 | ATGGAACAGAGGAAGTACGGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTTGATTATCAAAAATGGACAGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCCGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTCACTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGA | 720 | 51.11 | MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE | 239 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 594928 | 597514 | - | Carg06862-RA | Car20g00109 | 167968 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car20g00109 | 239 | ProSiteProfiles | Phytocyanin domain profile. | 34 | 154 | IPR003245 | GO:0009055 | |
| Car20g00109 | 239 | Pfam | Plastocyanin-like domain | 44 | 146 | IPR003245 | GO:0009055 | |
| Car20g00109 | 239 | MobiDBLite | consensus disorder prediction | 180 | 202 | - | - | |
| Car20g00109 | 239 | MobiDBLite | consensus disorder prediction | 157 | 202 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car17g00024 | Car-Chr17:107091 | Car20g00109 | Car-Chr20:594928 | 1.17E-21 | dispersed | |
| Car20g00109 | Car-Chr20:594928 | Car05g00463 | Car-Chr5:2643010 | 4.25E-13 | dispersed | |
| Car20g00109 | Car-Chr20:594928 | Car08g00831 | Car-Chr8:5558158 | 9.24E-33 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car20g00109 | - | - | cpep:111776932 | 461.455 |