Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00148 ATGGCGAGCAACAGAGTGGAAGAAACCGCCCCTGCTTCAACCCATCACCATCCTCACAATTCACATCTTTATGCAATCAACTACAACAATCCCTCCTCCACTTGCGAAGCTTTTGATATTGGAGAATTGGAACAAGCAATTGTGTTACAAGAACACGAAGCTAAGAACAAACTCAATCATCACCAATCCAAACAAACCTTTTTCTCAGGCAGGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTACTCTGGAAATGTTCCCTTCTTGGCCAATCAAATTCCAACAAACTCCCACAGTACTTCTTCTTATTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTCCTTCTTTATAATGTCTTCAAAATGCAACAGGGAATGAGTTCGAGACGAAGAGAAGAGAGCACTGATGAATCTCCCATGACTAAAAAGCCTTCTTCTTCTTCTTCTTCTTCTTCAGCTCATCAGGGCTTTACTCAGAAGCAGATTCACCCTGAAATGATACTCACTGATGTTTCAGCTCAACATCACTCCCTTCAACAAAAGAGAAAAGGATGTGGTTCGATTTCAACATCACAGAAGCAACTTGATGCTAAGGCTTACGTACAGCAACTTGAGAGCAGTAGAATCAAGCTCACTCAGCTTGAACAAGACCTTCAACGGGCACGAGCTCAGGGTTTGTTTCTTGGTGCCTGCGGTGGTGGCGGCGGCATTATCAGCCCAGGAGGTGCAATGTTTGACATGGAATATGCAAGGTGGTTGGACGAGGACCACCGGCACACGGCGGAGCTGCGCGGGGGACTGGAGGCACGCCTACCGGACGTGGAGCTGAGAGTGAAAGTAGACGCATGCATTTGCCATTACGACCAAATTTTCCGGCTGAAAGGAGAGGCTGCTAAGTCCGACATCTTCCATCTCATCGCCGGCATCTGGATGTCTCCGGCCGAGCGTTGCTTCCTTTGGATTGGTGGATTCCGGCCCTCCGATCTCATCAAGATTTTGCTGTCACAATTGGACCCAATCACAGAACACCAAGTGGTGGAAATTTACAAGCTACAGCATTCGTCACAGCAGGCTGAAGATGCTTTATCTCAAGGCCTTGATCAGCTCCATCAGTCTTTGACGGACACCGTAGCCGGCGGTCCGGTCATCGACGGCATCAACCACATGGTTCTGGCAATGGACAAGATCTCTCATCTCCAAGGCTTTCTCCATCAGGCGGATATTTTAAGACAACAAACGCTTCACCAATTGCATAGGATGCTCACCGTCCGACAAGCAGCCAGATGTTTTATAGTTATTAGTGAATATTACACTAGATTACGAGCCCTAAGCTCCATATGGTCCTCTCGTCCAAAGGACTAA 1389 48.16 MASNRVEETAPASTHHHPHNSHLYAINYNNPSSTCEAFDIGELEQAIVLQEHEAKNKLNHHQSKQTFFSGRPAAAAAAAAAAAAAAAAAATLEMFPSWPIKFQQTPTVLLLIPLLLLLLLLPLLLYNVFKMQQGMSSRRREESTDESPMTKKPSSSSSSSSAHQGFTQKQIHPEMILTDVSAQHHSLQQKRKGCGSISTSQKQLDAKAYVQQLESSRIKLTQLEQDLQRARAQGLFLGACGGGGGIISPGGAMFDMEYARWLDEDHRHTAELRGGLEARLPDVELRVKVDACICHYDQIFRLKGEAAKSDIFHLIAGIWMSPAERCFLWIGGFRPSDLIKILLSQLDPITEHQVVEIYKLQHSSQQAEDALSQGLDQLHQSLTDTVAGGPVIDGINHMVLAMDKISHLQGFLHQADILRQQTLHQLHRMLTVRQAARCFIVISEYYTRLRALSSIWSSRPKD 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 809734 813170 - Carg18430-RA Car20g00148 168007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00148 462 MobiDBLite consensus disorder prediction 136 165 - -
Car20g00148 462 Pfam Seed dormancy control 269 343 IPR025422 GO:0006351|GO:0043565
Car20g00148 462 MobiDBLite consensus disorder prediction 149 165 - -
Car20g00148 462 ProSiteProfiles DOG1 domain profile. 251 459 IPR025422 GO:0006351|GO:0043565
Car20g00148 462 Coils Coil 206 233 - -
Car20g00148 462 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00615 Car-Chr18:7367620 Car20g00148 Car-Chr20:809734 7.96E-127 dispersed
Car20g00148 Car-Chr20:809734 Car06g00014 Car-Chr6:153793 9.03E-104 dispersed
Car20g00148 Car-Chr20:809734 Car12g00121 Car-Chr12:640069 2.50E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00148 K14431 - csv:101223216 491.115