Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00153 ATGGAGTCTTCTCCGGACGACATCGCCGACGACCTCCAGAGCCTCAGCTTCAATTCCACCAACACCAACCGCAGCATCAGCTCCGGCTCCGAGACTACTCTCACCGCCTCCTCCTCATCCGTACACATCCCTTCTATTCTCAACAAGCCCCACGCGCCTTCTTCCGACCCTTGCTGGTCTGCCGTTAACCGGATCCGATCCGACTCGTCGTCTCGCCAACTCGCCTTCTCTGACCTTAAGTTCTTCAACCGCCTCGGTTCCGGCGACATTGGCTCCGTCTACCTCGCTGGCCTCAAGTCCACTGGAGCCGACGGATGCCTGTTCGCGGCGAAGGTAATGGATAAGAAGGAACTGGCGAGTCGGAGTAAAGAAGGCAGAGCAAGGACTGAGAGGGAGATTTTGGAGTCTTTAGACCATCCGTTTCTTCCGGCACTCTATGCTAGTATCGACTCGCCTAAGTGGCTCTGTCTCTTGACGGAGTTCTGTCCCGGCGGTGACCTTCATGTTCTCCGGCAACGGCAGCCTAACAAACGATTCGATGAACTCGCCGTAAGATTCTATGCATCTGAGATTGTGGTTGCTATCGAGTATCTTCACATGATGGGGATCGTTTACCGTGATCTGAAGCCTGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCAACGGCGACCCCACAGGTTATCAATTCTAAAAATCCGACAAATGGCACCGCCCTGCCAAAGGACTACCAAATTGATGCCCCTCCTTTTGCATCATCCTCCTGCATACTTCCAAACTGTATAGTCCCCGCCGTGTCATGTTTCAACCCAAAACGCAAGCGCAAGAAGAAGTCTGGTCGACGCAATGGACCTGAGTTTGTTGCCGAACCGGTCGACGTCCGGTCAATGTCATTTGTTGGCACCCACGAGTACTTGGCACCAGAGATTGTCTCCGGTGAGGGCCATGGAAGCGCAGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAATATAGTGGCCAGAGCCCTTGAGTTTCCTAAAGAACCGGCAGTGCCAGTGGCTGCAAAGGACCTCATTTCCCAGTTACTGGTCAAAGACCCGGCGAGGCGGCTGGGGTCAACGACAGGGTCGTCGGTGATCAAGCACCATTCATTTTTCCAAGGGGTGAATTGGGCATTATTGAGATGTACTACGCCACCATTTATTCCCCCACCATTTAGTAGAGAAAAAGTTGCATTGGATGAAAGCTGCCCTGTGGCCCCAATCGAGTATTATTAG 1356 52.51 MESSPDDIADDLQSLSFNSTNTNRSISSGSETTLTASSSSVHIPSILNKPHAPSSDPCWSAVNRIRSDSSSRQLAFSDLKFFNRLGSGDIGSVYLAGLKSTGADGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPALYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVINSKNPTNGTALPKDYQIDAPPFASSSCILPNCIVPAVSCFNPKRKRKKKSGRRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPVAAKDLISQLLVKDPARRLGSTTGSSVIKHHSFFQGVNWALLRCTTPPFIPPPFSREKVALDESCPVAPIEYY 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 860798 864758 - Carg18435-RA Car20g00153 168012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00153 451 ProSiteProfiles Protein kinase domain profile. 79 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00153 451 Pfam Protein kinase domain 309 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00153 451 Pfam Protein kinase domain 82 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00153 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01124 Car20g00153 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00153 Car-Chr20:860798 Car07g00311 Car-Chr7:1591049 2.20E-149 dispersed
Car20g00153 Car-Chr20:860798 Car20g00154 Car-Chr20:868294 1.16E-136 tandem
Car02g01124 Car-Chr2:7744738 Car20g00153 Car-Chr20:860798 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89590 PF00069 Pkinase 1.30E-34 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00153 K08286 - csv:101207262 852.818