Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00154 CCCGCGAGTTCTCTCTCTCTCTCTAATCCGGTTTCTCTCTCCTCTGCCATTTTTGGAGGTAGGAAAAGAAAGGAGAGTCACAGTCGAGAAGTCGAGTCGAGTTGTAGGCTCTCCTTCATAGCTCCTGTTGGCGTTGGCTTTGGATTTGGCTTTGGCTTTGGCGTGGTCTCTCTCAAATTCCTCGTGATTTCCTTTACCTACTGTTCCTTTCCCCCCTCTCTCTTTCCTCTTTCGCTTAAACCCTTTCTTTTTTCTTTCACTCTTTTTTTCATCCAATCCTTCGCTCTCTCCGTTTCCATTTTCGAATTCTGTCATCCGCAGCTCCGACTTGGCGGTTTTAGATGCTCCGGTTATCCTGACGTTACGGAAGGGAAACTCTGCCATTTGGCTGTTTTTGTTTCATCGGTTCGCTGCAAATTTCGGCTTCAGAGGACATTGGCACAGCGTTTGATATCGACATTGTACCTTATAAATGGGTTAGCAGTCCTAGCCAAAGCCACATCTTTTCTCTCCCTCTCTATTGTTATACCTCAGAAGATGACTACGTTAGCCAGTACTTCTGAAATTGTTGAATCAACAGAAGAAATTGATGCCGAGAAAGCTGGTACGAGTTACATGCTAGATGTTGGAAAAAGGTTTTCTATAGAGGATGACATTAACCATCTGTTTCAGGCAATTGATATCAGAACCTTACGTAAGAGGGCTGGGCAGCAACGTGAAGTTGATAAAGATGCCTTGCGAAAGAGTGCGATGAAAAGACCGGTTAGAGTAGGTTCATCTCACATGGCAGGGATAGGAATTTCTGAACCTGCAAGTTTGAAGCAGGCTTTGAGAGGCTTATGCATATCTCAGGCTGCAGAAATGGCTGCTTCAAAGAGGTTAACAAGGTTGGTAGGTTCACCCAGAATCTCTGAAGCAGGAACTATCAAGAGATTGTATAGGGCTGTGGTGGTTGAGGCCAATGGATCTGGTGTTCCTGTAAATGAAAGCAGAGCAAATTTGGTAGAAATTTCCATTGTTTCAGAAAGAATCATGTCAACTTCTCAAAATAAGATGCCTGAGTCGTTACATAAAACTCAGACAGATATATCAAACCAAGGAGCCGAGTCTTCTTCTTTCAAGGATACTGGGGTATCAGAAGAGGCGAGTGTGGATAGAGTGATGTCAAAGGATCTTGTAGTTAATATGGCTACTGAGGCGACGAGTTTAAAGGCACCTGGTGAAGTGGAAAAACTTAAATCTCCTTCCCTTACTCCTACTGGTGAGAAGGATCTGGCTGTGAACAGCATGGCTATTTCCTCAACTGAAGATTTGACAAAAGATTCAGTACCGAAGAAGGAGGAGAGAGGTACAATGCGTTGTTTATCTTCTCTATCAAGCTCGGGATCTGTTGTCAAGCTGAACAAATCAGCTTTCAATAATACACGTTTCATCAAACCTATTTTCAGGTCCAAGAGTTTTGTCAAGAAGAAAGCAAAACTTGAGCCAAATTCCTCCCCTAGCGTTTTCGATGGGTGCACAGAAAAGCTCGACACTGATTTGGGTCCCATAGCAGAAAAATCTGAGAACCAGATGACAGAAAATGCACAGCATCATGAGAGTAAAGAAGAAGATAAAGGTTATTCTGTCTCTAGTAGCATAACTTTAGGTACTGAAGTAAATGGAAATGTAGTAAGCACAGAATCTAGTAGACCTGGTACATCTCTCAACTGCTGTAACAGGAACAGACCAACTATTATGCCATTCGATGAGAGATCGAGATCGAGAGAAAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTATCGGCGAATGTAGTAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTTAGTGGATCAAGTCGTAGTGGAGTTAGGCCTCACATGTCAAAGGATTTGAAATGGGAAGCAATCCTCCACCTTCAGGATCAACATAAATTCCTAGGTCTGAGAAATTTCAAGCTGCTAAGGAGACTTGGTCTCGGGGACATTGGGACCGTGTATCTTTCTGAGCTGTGCGGTTCAAGCTGTCTATTTGCTATTAAAGTGATGGACAAGGAGTTCTTGGCAAGCAGGAAAAAAATACTTCGGGCACAAACTGAGAGAGAGATACTGCAAATGCTCGACCATCCATTTCTTCCTACATTATATGCCCATTTTGAGACGGATAAGCACTCATGCTTGGTCATGGACTACTGTCCTGGTGGAGATCTCCATGTGCTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTTGCCGAAGTTCTTCTTGCCCTGGAGTACTTACATATGCTAGGAGTTGTTTACCGTGACCTGAAACCCGAAAATGTTCTGGTTCGAGAAGATGGGCACATCATGCTCACGGATTTTGATTTGTCTCTTAGATGTTCTTTTAACCCAACGTTGCTTCAATCATCATCTCCAGTTGTGGAATCCACTAAGAGGACTCTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGGTCTCATGCTTCACTCCCAAAGTTGTATCTGCTCCATACAAATCCCGGAGAACGAAAACAGATCATAACGCTGGTCTATTACCGCAGCTTATTGTCGAACCAACTGGTGCGCGGTCCAATTCATTTGTAGGAACCCACGAATACCTTGCTCCTGAGATTGTCAAGGGTGATAGCCATGGGAGTGCTGTTGATTGGTGGACTTACGGGATTTTCCTGTTTGAGCTTCTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAACCTCTCAAGTTCCCCGATTGCCCTATAGTTAGTTTTCATGCAAGAGACCTGATTAGATGTCTGCTGGCAAAGGAACCCGAAAACCGATTAGGCTCAACAAAAGGGGCTATCGAGATTAAGCAGCATCCGTTTTTTGAAGGCCTCAACTGGGCTCTGATACGTTGTGCAGCTCCCCCCGAGCTTCCTAAGTTTTTCGACGGTGGAACTGGTGCAATGCCAATGGATTCTGGGGAGAGTACAAAGCGTAGAGATCTCGAGAATATGGAAGCAGATGCAGCAATCTTTGACCTGTTTTAG 3117 44.34 PASSLSLSNPVSLSSAIFGGRKRKESHSREVESSCRLSFIAPVGVGFGFGFGFGVVSLKFLVISFTYCSFPPSLFPLSLKPFLFSFTLFFIQSFALSVSIFEFCHPQLRLGGFRCSGYPDVTEGKLCHLAVFVSSVRCKFRLQRTLAQRLISTLYLINGLAVLAKATSFLSLSIVIPQKMTTLASTSEIVESTEEIDAEKAGTSYMLDVGKRFSIEDDINHLFQAIDIRTLRKRAGQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRLVGSPRISEAGTIKRLYRAVVVEANGSGVPVNESRANLVEISIVSERIMSTSQNKMPESLHKTQTDISNQGAESSSFKDTGVSEEASVDRVMSKDLVVNMATEATSLKAPGEVEKLKSPSLTPTGEKDLAVNSMAISSTEDLTKDSVPKKEERGTMRCLSSLSSSGSVVKLNKSAFNNTRFIKPIFRSKSFVKKKAKLEPNSSPSVFDGCTEKLDTDLGPIAEKSENQMTENAQHHESKEEDKGYSVSSSITLGTEVNGNVVSTESSRPGTSLNCCNRNRPTIMPFDERSRSREKGMFSQSSKSSIGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAILHLQDQHKFLGLRNFKLLRRLGLGDIGTVYLSELCGSSCLFAIKVMDKEFLASRKKILRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCSFNPTLLQSSSPVVESTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVVSAPYKSRRTKTDHNAGLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDSHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQPLKFPDCPIVSFHARDLIRCLLAKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCAAPPELPKFFDGGTGAMPMDSGESTKRRDLENMEADAAIFDLF 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 868294 872455 + Carg18436-RA Car20g00154 168013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00154 1038 MobiDBLite consensus disorder prediction 348 378 - -
Car20g00154 1038 MobiDBLite consensus disorder prediction 541 575 - -
Car20g00154 1038 MobiDBLite consensus disorder prediction 524 625 - -
Car20g00154 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Car20g00154 1038 Pfam Protein kinase domain 882 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00154 1038 Pfam Protein kinase domain 654 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00154 1038 MobiDBLite consensus disorder prediction 525 540 - -
Car20g00154 1038 MobiDBLite consensus disorder prediction 593 625 - -
Car20g00154 1038 ProSiteProfiles Protein kinase domain profile. 653 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00154 1038 MobiDBLite consensus disorder prediction 348 380 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01125 Car20g00154 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00867 Car-Chr7:4623377 Car20g00154 Car-Chr20:868294 0 dispersed
Car18g00579 Car-Chr18:6510796 Car20g00154 Car-Chr20:868294 0 dispersed
Car20g00154 Car-Chr20:868294 Car11g01352 Car-Chr11:11072588 3.30E-177 dispersed
Car20g00153 Car-Chr20:860798 Car20g00154 Car-Chr20:868294 1.16E-136 tandem
Car02g01125 Car-Chr2:7751331 Car20g00154 Car-Chr20:868294 0 transposed
Car20g00154 Car-Chr20:868294 Car03g01056 Car-Chr3:8614273 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89591 PF00069 Pkinase 8.80E-36 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00154 - - cpep:111777395 1612.43