Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00218 ATGGATGGTAGTGTACGAGCTCGTTTCCCACTCGGCAAACAGTCATCGCTCAAGCCGGAACGTGAAGATTCGGCTGTGGTTACCGATGAGCTTGATGATTCGATCGTGATTGACCCTGGGATTAAGCTTATGTACCTGGCGAATGATGGCGATTCGGATGGGATTAGGGAGCTACTGGATTCGGGTACCGACGTGAATTTTCACGACACTGATGGCCGAACCTCTTTGCATGTTGCTAGTTGTCAGGGCAGGCTGGACGTCGTTGAGTTGCTACTCGAACGTGGTGCAGACGTTGACGTTCAGGACCGATGGGGCAGCACGCCTCTTGCAGATGCCATATATTACAAGAATCATGATGTGATCAAACTCTTAGAAAAACATGGTGCAAAGCTACCGATGGCGCCAATGGTAGTGCAAAATGCTCTTGAAGTTCCGGAATATGAGATCGATCCAAATGAACTTGATTTTTCTAAGAGTGTGAACATTACAAAAGGAACTTTCTGCAGTGCTTCTTGGCGTGGAATTGAAGTTGCCGTGAAGACACTAGGCAAGGATGTTTTCTCCGACGAGGATAAAGTGAAGGCATTTAGGGATGAACTTGCTTTACTACAGAAGATACGGCATCCTAATGTTGTGCAATTCCTGGGAGCTGTAACACAAAGTAGTCCAATGATGATTGTCACAGAGTATTTGCCCCAGGGGGACCTTCATGCATTCTTGGAGTGTAAAGGTTCCTTGAAGCTACCAACAGTTGTAAAGTTTGCTCTTGACATTGCAAGAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTTGCAGACTTTGGAGTTAGCAAACTTCTAAAATTTTCTAATAGAGTTAAAGAAGACAGACCTGTGGCTGCGACATGTCAGGAGACTTCATGGAAATATGCTGCACCTGAGGTTTATAAAAATGAAGAATATGATACGAAAGTGGATGTGTTTTCATTTGCTTTGATATTGCAAGAGATGATAGAAGGCAATCCACCTTTTTCAACAAAGCCAGAAAATGAAGTACCCAAAGCTTATGTAGCTAATGAACGGCCACCATTTACGGCTCCACCTAAGCGTTATCGGCATGGAATACAGGAACTAATCCAGGAATGTTGGGATGAGAAGCCACATAAAAGACCCACGTTTCGGCAAATAATCGAAAGGTTGGAGGATATTAACACTAAACTTATGCAAACAAGAAGCTTGAAGGTGAATCCATTCTGCAATTGTTTCCGGAACCTGAAAGCCTTATTTACAAGTGAAAGGACTAATCCAGGCAGCAGATCTTCTTACTCGGAAGCCAAATGA 1323 44.07 MDGSVRARFPLGKQSSLKPEREDSAVVTDELDDSIVIDPGIKLMYLANDGDSDGIRELLDSGTDVNFHDTDGRTSLHVASCQGRLDVVELLLERGADVDVQDRWGSTPLADAIYYKNHDVIKLLEKHGAKLPMAPMVVQNALEVPEYEIDPNELDFSKSVNITKGTFCSASWRGIEVAVKTLGKDVFSDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLECKGSLKLPTVVKFALDIARNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAATCQETSWKYAAPEVYKNEEYDTKVDVFSFALILQEMIEGNPPFSTKPENEVPKAYVANERPPFTAPPKRYRHGIQELIQECWDEKPHKRPTFRQIIERLEDINTKLMQTRSLKVNPFCNCFRNLKALFTSERTNPGSRSSYSEAK 440
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 1256883 1264941 + Carg03449-RA Car20g00218 168077
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car20g00218 440 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Car20g00218 440 ProSiteProfiles Protein kinase domain profile. 156 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00218 440 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Car20g00218 440 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Car20g00218 440 MobiDBLite consensus disorder prediction 1 24 - -
Car20g00218 440 Pfam Protein tyrosine and serine/threonine kinase 259 394 IPR001245 GO:0004672|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01214 Car-Chr3:9473607 Car20g00218 Car-Chr20:1256883 2.85E-75 dispersed
Car11g00638 Car-Chr11:3512697 Car20g00218 Car-Chr20:1256883 1.36E-09 dispersed
Car18g00413 Car-Chr18:2588834 Car20g00218 Car-Chr20:1256883 0 dispersed
Car18g01039 Car-Chr18:10720494 Car20g00218 Car-Chr20:1256883 1.71E-69 dispersed
Car19g00236 Car-Chr19:2383166 Car20g00218 Car-Chr20:1256883 3.16E-89 dispersed
Car02g00035 Car-Chr2:281957 Car20g00218 Car-Chr20:1256883 6.27E-167 transposed
Car11g01213 Car-Chr11:9864531 Car20g00218 Car-Chr20:1256883 2.73E-80 transposed
Car20g00860 Car-Chr20:7616022 Car20g00218 Car-Chr20:1256883 1.81E-06 transposed
Car02g00034 Car-Chr2:280441 Car20g00218 Car-Chr20:1256883 8.53E-91 wgd
Car20g00218 Car-Chr20:1256883 Car03g01213 Car-Chr3:9472113 6.62E-80 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89595 PF07714 PK_Tyr_Ser-Thr 9.40E-24 CL0016 Car PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00218 - - cpep:111777411 870.537