Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00226 ATGTCAAATAATGAAGATCGTGAGAAGGATCCTTATTACCCAAACTTTGAAGCTTTTGATCCTTCTAATGTGGGGTTTTACTCTGATTTCTTATATGATTACAACAACTTCCTCTCTACCGACATCGACATATCGTGTTCGTCGTCGGAAGCTATTTCTCCAATCAACGATGCTTTGAAGAAGTCGTTGGGTCTCAGAGAGTCGGTGGCGACCGGTGAGCATCCATCGACGCCGAATTCCTCGACTACGTGTTCGTCGGTCGAGGCGGCCGCCGGTGGTAGCGATTCAGCCAAGAGTGGGGAGGAGAAAAGAGAAAAAGGGCCAAGATTTGCGTTCTTGACCAAATCTGAAATTGATAACCTTGAAGATGGGTATAGATGGAGAAAATATGGGCAAAAAGCTGTAAAAAACAGCCCTTTTCCAAGAAGTTATTATAAATGCACGAGTCAAAATTGCAGTGTGAAAAAGAGAGTAGAAAGATCATCAGAAGATCCATGTTTTGTTGTAACAACGTACGAAGGGAAACACAACCACTACTGTCCGATTACACTTCGAGGGCACAATGTGGCCGGAGTTTATCCGCCGTCGGCTTCACCGTCGTTGATTCCGACGAGAATCTTGTCCGGCGAGTTCTATGGAGGGGTGGATCTGCAGCAACAATACTACGAGGTTCCTGGGTATGGGGTGTTGGAAGATCTGGTAAATCCAAAGCAAAACCCATGA 723 45.5 MSNNEDREKDPYYPNFEAFDPSNVGFYSDFLYDYNNFLSTDIDISCSSSEAISPINDALKKSLGLRESVATGEHPSTPNSSTTCSSVEAAAGGSDSAKSGEEKREKGPRFAFLTKSEIDNLEDGYRWRKYGQKAVKNSPFPRSYYKCTSQNCSVKKRVERSSEDPCFVVTTYEGKHNHYCPITLRGHNVAGVYPPSASPSLIPTRILSGEFYGGVDLQQQYYEVPGYGVLEDLVNPKQNP 240
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 1304429 1305598 + Carg03440-RA Car20g00226 168085
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car20g00226 240 MobiDBLite consensus disorder prediction 67 107 - -
Car20g00226 240 Pfam WRKY DNA -binding domain 122 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car20g00226 240 MobiDBLite consensus disorder prediction 72 92 - -
Car20g00226 240 ProSiteProfiles WRKY domain profile. 116 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car19g00856 Car20g00226 CCT
Car19g00856 Car20g00226 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00226 Car-Chr20:1304429 Car06g01335 Car-Chr6:9575672 5.13E-39 dispersed
Car20g00952 Car-Chr20:10954515 Car20g00226 Car-Chr20:1304429 1.05E-27 dispersed
Car11g01645 Car-Chr11:12951829 Car20g00226 Car-Chr20:1304429 2.90E-61 wgd
Car19g00856 Car-Chr19:8938314 Car20g00226 Car-Chr20:1304429 2.95E-61 wgd
Car20g00226 Car-Chr20:1304429 Car03g01238 Car-Chr3:9577419 3.10E-43 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5339 PF03106 WRKY 2.40E-25 CL0274 Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00226 - - cmos:111448234 469.544