Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00269 ATGAACTATGATCTGATCGAGAACTATCATCTTATACAGCGAGACACAACGGGTCTCAGTACTGAGAATACAGAGCTTAAGCTTCGTTTGCAGGCTATGGAGCAACAAGCCCAAATGCGTGATGCTTTGAACGAAGCATTGAAGAAGGAAGTTGAGAGGCTTAAAATTGCTACCGGAGAAATGATGAGCCCTTCCGAGTCTTTTAACTTGGGAATGCATCACATGGCATACGCCCCATCGTCTTTCATTCAACTTTCACAGCAACCAGGGTCTGCTGGCCCTCAAAACATTCAAATGCCACCATATAACCATTCCCCATCCAACATGTCTAGCCACCCTCTGCATCCATCAGACTCTCATTCTCTCTCGGAGGTGCTACAAAGCGACCCTCTCGGTCGATTACAGGGTCTCGATATCAGTAGTAAAGGATCGTCGCTTGTGAAATCCGAGGACCCTTCTCTCTCTGCTAGTGAGAGCAGTACAACCTTTTGA 492 46.75 MNYDLIENYHLIQRDTTGLSTENTELKLRLQAMEQQAQMRDALNEALKKEVERLKIATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQPGSAGPQNIQMPPYNHSPSNMSSHPLHPSDSHSLSEVLQSDPLGRLQGLDISSKGSSLVKSEDPSLSASESSTTF 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1559284 1561531 + Carg03397-RA Car20g00269 168128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00269 163 MobiDBLite consensus disorder prediction 138 163 - -
Car20g00269 163 Coils Coil 30 60 - -
Car20g00269 163 MobiDBLite consensus disorder prediction 81 163 - -
Car20g00269 163 MobiDBLite consensus disorder prediction 81 128 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00663 Car20g00269 CCT
Car02g00508 Car20g00269 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00269 Car-Chr20:1559284 Car04g02353 Car-Chr4:18925173 9.12E-21 dispersed
Car20g00269 Car-Chr20:1559284 Car02g00508 Car-Chr2:3978344 1.33E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00269 - - cpep:111777065 266.159