Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00279 GGTTGCGATGGATCGATTCTTCTAGAAGATACTCCTACGTTTACCGGAGAGCAAACTGCAGCTCCTAATAATAGATCCGTTAGAGGGTTCAATGTGATTGAGAGTATAAAGAAAAATGTTGAAAAAGTTTGTCCTGGTGTTGTCTCTTGTGCTGATATATTGACTCTTTCTGCTCGTGACTCTGTTGTGGCTCTTGGAGGACCAAGTTGGAAGGTTAAATTAGGGAGAAGAGATTCCAAAACAGCCAGCTTCTCTGATGTCGTTGGTGCCATTCCTCCGCCAACTTCCACCCTCGACACCCTCATTAACCGATTCAACACCAAGGGCCTCTCCCCTCGAGACTTGGTTGCCTTATCCGGAGCCCACACCATTGGACAAGCTCGGTGTTTGTTTTTCAAGAATCGTATATACAACGAGACCAACATCGAC 429 45.92 GCDGSILLEDTPTFTGEQTAAPNNRSVRGFNVIESIKKNVEKVCPGVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFSDVVGAIPPPTSTLDTLINRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNETNID 143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1609496 1610125 - Carg03387-RA Car20g00279 168138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00279 143 ProSitePatterns Peroxidases proximal heme-ligand signature. 114 124 IPR019793 -
Car20g00279 143 ProSiteProfiles Plant heme peroxidase family profile. 1 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00279 143 Pfam Peroxidase 1 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00279 Car-Chr20:1609496 Car11g01584 Car-Chr11:12568065 6.48E-58 dispersed
Car20g00278 Car-Chr20:1602725 Car20g00279 Car-Chr20:1609496 9.23E-62 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00279 K00430 - csv:101204245 283.493