Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00286 ATGGCCACCGAGGCGACCGAAGCCTCGGCTAAGTTGAAGAGTCCGGATTTTCGCCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTCTGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCTGGTTCAATCGCTGGGTCTGTTGAGCATATGGCTATGTTTCCGGTTGATACAGTCAAGACCCATATGCAAGCCCTTGGCTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCGCTTCGGTCAATTTTGAAGACAGAGGGACCTGCTGGTTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCTGCACATGCTGTGTATTTTACAGTCTACGAGGATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTGTTGCCCACGCTGCTTCTGGTGTCTGTGCAACGGTGGCGAGTGACGCTGTTTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAGTCCCTACAAGGGGGTTTTGGATTGTGTCACAAGGGTCCTCAGAGACGAGGGGTTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTAATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGCTGGAGGTTTCGCCAGAGATTGTAAATAATGAACAGTGGATCGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCATTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAACTACAATGTCAGGGTGTATGTGGCTGCGATAGATTCAAAAGCGGGTCGATAGAAGACGTCGTTAGGACAATACTCAAGAAGGACGGATATCGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTCTTTCACGCTCCGGCTGCTGCTATTTGCTGGTCGACATACGAAGCGATAAAATCTCTGTTCCAAGAGCTCAATGGCAGCAGTGACGAAATGACATGA 993 48.34 MATEATEASAKLKSPDFRPVPSPPDFHPEILVSAHDGLRFWQFMIAGSIAGSVEHMAMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKTEGPAGFYRGIGAMGLGAGPAHAVYFTVYEDCKKFFSGGDPNNSVAHAASGVCATVASDAVFTPMDMVKQRLQLSNSPYKGVLDCVTRVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLLEVSPEIVNNEQWIVHATAGAAAGASAAFVTTPLDVVKTQLQCQGVCGCDRFKSGSIEDVVRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEAIKSLFQELNGSSDEMT 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1658473 1662521 - Carg03380-RA Car20g00286 168145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00286 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Car20g00286 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Car20g00286 330 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 326 - -
Car20g00286 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Car20g00286 330 Gene3D Mitochondrial carrier domain 25 166 IPR023395 -
Car20g00286 330 Pfam Mitochondrial carrier protein 38 127 IPR018108 -
Car20g00286 330 Pfam Mitochondrial carrier protein 229 321 IPR018108 -
Car20g00286 330 Pfam Mitochondrial carrier protein 133 218 IPR018108 -
Car20g00286 330 Gene3D Mitochondrial carrier domain 167 330 IPR023395 -
Car20g00286 330 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Car20g00286 330 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Car20g00286 330 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Car20g00286 330 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Car20g00286 330 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Car20g00286 330 PANTHER MITOFERRIN-1-RELATED 5 326 - -
Car20g00286 330 SUPERFAMILY Mitochondrial carrier 36 314 IPR023395 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00514 Car20g00286 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00292 Car-Chr3:4024213 Car20g00286 Car-Chr20:1658473 1.82E-157 dispersed
Car04g02347 Car-Chr4:18856135 Car20g00286 Car-Chr20:1658473 9.97E-11 dispersed
Car07g01060 Car-Chr7:6169886 Car20g00286 Car-Chr20:1658473 3.11E-151 dispersed
Car15g00536 Car-Chr15:2919035 Car20g00286 Car-Chr20:1658473 1.99E-36 dispersed
Car20g00286 Car-Chr20:1658473 Car06g00883 Car-Chr6:6876865 2.81E-35 dispersed
Car02g00515 Car-Chr2:4065433 Car20g00286 Car-Chr20:1658473 1.21E-06 transposed
Car02g00514 Car-Chr2:4062978 Car20g00286 Car-Chr20:1658473 3.17E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00286 K15113 - csv:101215924 617.461